Search Results: "ag"

17 November 2014

Chris Lamb: Calculating the number of pedal turns on a bike ride

If you have a cadence sensor on your bike such as the Garmin GSC-10, you can approximate the number of pedal turns you made on the bike ride using the following script (requires GPSBabel):
#!/bin/sh
STYLE="$(mktemp)"
cat >$ STYLE  <<EOF
FIELD_DELIMITER COMMA
RECORD_DELIMITER NEWLINE
OFIELD CADENCE,"","%d"
EOF
exec gpsbabel -i garmin_fit -f "$ 1 " -o xcsv,style=$ STYLE  -F-  
    awk ' x += $1  END  print int(x / 60) '
... then call with:
$ sh cadence.sh ~/path/to/2014-11-16-14-46-05.fit
24344
Unfortunately the Garmin .fit format doesn't store the actual number of pedal turns, only the average for each particular second. However, it should be reasonably accurate given that one keeps a reasonably steady cadence. As a bonus, using a small amount of shell plumbing you can then sum an entire year's worth of riding like so:
$ for X in ~/path/to/2014-*.fit; do sh cadence.sh $ X ; done   awk ' x += $1  END   print x  '
749943

Paul Tagliamonte: BOS -> DC

Hello, World Been a while since my last blog post - things have been a bit hectic lately, and I ve not really had the time. Now that things have settled down a bit I m in DC! I ve moved down south to join the rest of my colleagues at Sunlight to head up our State & Local team. Leaving behind the brilliant Free Software community in Boston won t be easy, but I m hoping to find a similar community here in DC.

16 November 2014

Daniel Leidert: Getting the audio over HDMI to work for the HP N54L microserver running Debian Wheezy and a Sapphire Radeon HD 6450

Conclusion: Sound over HDMI works with the Sapphire Radeon HD 6450 card in my HP N54L microserver. It requires a recent kernel and firmware from Wheezy 7.7 backports and the X.org server. There is no sound without X.org, even if audio has been enabled for the radeon kernel module. Last year I couldn't get audio over HDMI to work after I installed a Sapphire Radeon HD 6450 1 GB (11190-02-20g) card into my N54L microserver. The cable that connects the HDMI interfaces between the card and the TV monitor supports HDMI 1.3, so audio should have been possible even then. However, I didn't get any audio output by XBMC playing video or music files. Nothing happened with stock Wheezy 7.1 and X.org/XBMC installed. So I removed the latter two and used the server as stock server without X/desktop and delayed my plans for an HTPC.Now I tried again after I found some new hints, that made me curious for a second try :) Imagine my joy, when (finally) speaker-test produced noise on the TV! So here is my configuration and a step-by-step guide to
  • enable Sound over HDMI for the Radeon HD 6450
  • install a graphical environment
  • install XBMC
  • automatically start XBMC on boot
The latter two will be covered by a second post. Also note, that there is lot of information out there to achive the above tasks. So this is only about my configuration. Some packages below are marked as optional. A few are necessary only for the N54L microserver (firmware) and for a few I'm not sure they are necessary at all. Step 1 - Prepare the systemAt this point I don't have any desktop nor any other graphical environment (X.org) installed. First I purged pulseaudio and related packages completely and only use ALSA:
# apt-get autoremove --purge pulseaudio pulseaudio-utils pulseaudio-module-x11 gstreamer0.10-pulseaudio
# apt-get install alsa-base alsa-utils alsa-oss
Next I installed a recent linux kernel and recent firmware from Wheezy backports:
# apt-get install -t wheezy-backports linux-image-amd64 firmware-linux-free firmware-linux firmware-linux-nonfree firmware-atheros firmware-bnx2 firmware-bnx2x
This put linux-image-3.16-0.bpo.3-amd64 and recent firmware onto my system. I've chosen to upgrade linux-image-amd64 instead to pick a special (recent) linux kernel package from Wheezy backports to keep up-to-date with recent kernels from there.Then I enabled the audio output of the kernel radeon module. Essentially there are at least three ways to do this. I use the one to modify /etc/modules.d/radeon.conf and set the audio parameter there. The hw_i2c parameter is disabled. I read, that it might cause trouble with the audio output here although I never personally experienced it:
options radeon audio=1 hw_i2c=0
JFTR: This is how I boot the N54L by default:
GRUB_CMDLINE_LINUX_DEFAULT="quiet splash acpi=force pcie_aspm=force nmi_watchdog=0"
After rebooting I see this for the Radeon card in question:

# lsmod egrep snd\ radeon\ drm awk ' print $1 ' sort
[..]
drm
drm_kms_helper
i2c_algo_bit
i2c_core
radeon
snd
snd_hda_codec
snd_hda_codec_hdmi
snd_hda_controller
snd_hda_intel
snd_hwdep
snd_pcm
snd_seq
snd_seq_device
snd_timer
soundcore
ttm
[..]
# lspci -k
[..]
01:00.0 VGA compatible controller: Advanced Micro Devices, Inc. [AMD/ATI] Caicos [Radeon HD 6450/7450/8450 / R5 230 OEM]
Subsystem: PC Partner Limited / Sapphire Technology Device e204
Kernel driver in use: radeon
01:00.1 Audio device: Advanced Micro Devices, Inc. [AMD/ATI] Caicos HDMI Audio [Radeon HD 6400 Series]
Subsystem: PC Partner Limited / Sapphire Technology Radeon HD 6450 1GB DDR3
Kernel driver in use: snd_hda_intel
[..]
# cat /sys/module/radeon/parameters/audio
1
# cat /sys/module/radeon/parameters/hw_i2c
0
# aplay -l
**** List of PLAYBACK Hardware Devices ****
card 0: HDMI [HDA ATI HDMI], device 3: HDMI 0 [HDMI 0]
Subdevices: 0/1
Subdevice #0: subdevice #0
# aplay -L
null
Discard all samples (playback) or generate zero samples (capture)
pulse
PulseAudio Sound Server
hdmi:CARD=HDMI,DEV=0
HDA ATI HDMI, HDMI 0
HDMI Audio Output
At this point, without having the X.org server installed, I still have no audio output to the connected monitor. Running alsamixer I only see the S/PDIF bar for the HDA ATI HDMI device, showing a value of 00. I can mute and un-mute this device but not change the value. No need to worry, sound comes with step two. Step 2 - Install a graphical environment (X.org server)Next is to install a graphical environment, basically the X.org server. This is done in Debian by the desktop task. Unfortunately tasksel makes use of APT::Install-Recommends="true" and would install a desktop environment and some more recommended packages. At the moment I don't want this, only X. So basically I installed only the task-desktop package with dependencies:
# apt-get install task-desktop xfonts-cyrillic
Next is to install a display manager. I've chosen lightdm:
# apt-get install lightdm accountsservice
Done. Now (re-)start the X server. Simply ...
# service lightdm restart
... should do. And now there is sound, probably due to the X.org Radeon driver. The following command created noise on the two monitor speakers :)
# speaker-test -c2 -D hdmi:0 -t pink
Finally there is sound over HDMI! Step 3 - Install XBMC To be continued ...

Daniel Leidert: Install automatically starting XBMC to N54L microserver under Debian Wheezy 7.7

This is a followup to my previous post about getting sound output from the Sapphire Radeon HD 6450 card in my HP N54L microserver via HDMI. This post will describe, howto install XBMC from Wheezy backports and how to automatically start it. Again, there are vaious ways and I'll only describe mine. Further, this is, what I did so far: enable the audio output for the Radeon card and install X.org together with lightdm. Step 3 - Install XBMCThis is a pretty easy task. I've chosen to install XBMC 13.2 from the Wheezy backports repository.
# apt-get install -t wheezy-backports xbmc
Step 4 - Automically start XBMCThere are various ways; some involve starting it a s a service using init scripts f r sysvinit or upstrart or systemd. You'll easily find them. I've chosen to create a user, automatically log him into X and start XBMC. The user is called xbmc.
# adduser --home /home/xbmc --add_extra_groups xbmc
I used to choose a password. But I wonder, if using --disabled-password would work too? Next I adjusted /etc/lightdm/lightdm.conf. Below are only the differences to the stock version of this file. I haven't touched other lines.
[SeatDefaults]
greeter-session=lightdm-gtk-greeter
user-session=XBMC
autologin-guest=false
autologin-user=xbmc
autologin-user-timeout=0
The file /usr/share/xsessions/XBMC.desktop is the stock one, no changes made. After restarting lightdm:
# service lightdm restart
XBMC is started automatically. If anything goes wrong or doesn't work, I suggest to check /var/log/auth.log, /home/xbmc/.xsession-errors and /var/log/lightdm/*.log. In a few cases it seems necessary to login the user xbmc manually once although it wasn't necessary here.JFTR: When I checked /var/log/auth.log I saw a few errors and installed gnome-keyring too:
apt-get install --install-recommends gnome-keyring
Step 5 - Useful packagesThere are some packages, which might be useful running XBMC, e.g. ConclusionI'm now running XBMC on top of Debian Wheezy on the N54L microserver without a bloated desktop environment. The system automatically starts the XBMC session on start/reboot. Video and sound are working fine, though it was necessary to install recent firmware and a recent kernel from Wheezy backports to get it done. Thanks to the whole OSS community for aksing, for answering, for blogging, for using and for continue developing! I currently enjoy the results :)

Tollef Fog Heen: Resigning as a Debian systemd maintainer

Apparently, people care when you, as privileged person (white, male, long-time Debian Developer) throw in the towel because the amount of crap thrown your way just becomes too much. I guess that's good, both because it gives me a soap box for a short while, but also because if enough people talk about how poisonous the well that Debian is has become, we can fix it. This morning, I resigned as a member of the systemd maintainer team. I then proceeded to leave the relevant IRC channels and announced this on twitter. The responses I've gotten have been almost all been heartwarming. People have generally been offering hugs, saying thanks for the work put into systemd in Debian and so on. I've greatly appreciated those (and I've been getting those before I resigned too, so this isn't just a response to that). I feel bad about leaving the rest of the team, they're a great bunch: competent, caring, funny, wonderful people. On the other hand, at some point I had to draw a line and say "no further". Debian and its various maintainer teams are a bunch of tribes (with possibly Debian itself being a supertribe). Unlike many other situations, you can be part of multiple tribes. I'm still a member of the DSA tribe for instance. Leaving pkg-systemd means leaving one of my tribes. That hurts. It hurts even more because it feels like a forced exit rather than because I've lost interest or been distracted by other shiny things for long enough that you don't really feel like part of a tribe. That happened with me with debian-installer. It was my baby for a while (with a then quite small team), then a bunch of real life thing interfered and other people picked it up and ran with it and made it greater and more fantastic than before. I kinda lost touch, and while it's still dear to me, I no longer identify as part of the debian-boot tribe. Now, how did I, standing stout and tall, get forced out of my tribe? I've been a DD for almost 14 years, I should be able to weather any storm, shouldn't I? It turns out that no, the mountain does get worn down by the rain. It's not a single hurtful comment here and there. There's a constant drum about this all being some sort of conspiracy and there are sometimes flares where people wish people involved in systemd would be run over by a bus or just accusations of incompetence. Our code of conduct says, "assume good faith". If you ever find yourself not doing that, step back, breathe. See if there's a reasonable explanation for why somebody is saying something or behaving in a way that doesn't make sense to you. It might be as simple as your native tongue being English and their being something else. If you do genuinely disagree with somebody (something which is entirely fine), try not to escalate, even if the stakes are high. Examples from the last year include talking about this as a war and talking about "increasingly bitter rear-guard battles". By using and accepting this terminology, we, as a project, poison ourselves. Sam Hartman puts this better than me:
I'm hoping that we can all take a few minutes to gain empathy for those who disagree with us. Then I'm hoping we can use that understanding to reassure them that they are valued and respected and their concerns considered even when we end up strongly disagreeing with them or valuing different things.
I'd be lying if I said I didn't ever feel the urge to demonise my opponents in discussions. That they're worse, as people, than I am. However, it is imperative to never give in to this, since doing that will diminish us as humans and make the entire project poorer. Civil disagreements with reasonable discussions lead to better technical outcomes, happier humans and a healthier projects.

John Goerzen: Contemplative Weather

Sometimes I look out the window and can t help but feel this weather is deep. Deep with meaning, with import. Almost as if the weather is confident of itself, and is challenging me to find some meaning within it. This weekend brought the first blast of winter to the plains of Kansas. Saturday was chilly and windy, and overnight a little snow fell. Just enough to cover up the ground and let the tops of the blades of grass poke through. Just enough to make the landscape look totally different, without completely hiding what lies beneath. Laura and I stood silently at the window for a few minutes this morning, gazing out over the untouched snow, extending out as far as we can see. Yesterday, I spent some time with my great uncle and aunt. My great uncle isn t doing so well. He s been battling cancer and other health issues for some time, and can t get out of the house very well. We talked for an hour and a half about news of the family, struggles in life now and in the past, and joys. There were times when all three of us had tears in our eyes, and times when all of us were laughing so loudly. My great uncle managed to stand up twice while I was there this took quite some effort once to give me a huge hug when I arrived, and another to give me an even bigger hug when I left. He has always been a person to give the most loving hugs. He hadn t been able to taste food for awhile, due to treatment for cancer. When I realized he could taste again, I asked, When should I bring you some borscht? He looked surprised, then got a huge grin, glanced at his watch, and said, Can you be back by 3:00? His brother, my grandpa, was known for his beef borscht. I also found out my great uncle s favorite kind of bread, and thought that maybe I would do some cooking for him sometime soon. Today on my way home from church, I did some shopping. I picked up the ingredients for borscht and for bread. I came home, said hi to the cats that showed up to greet me, and went inside. I turned on the radio Prairie Home Companion was on and started cooking. It takes a long time to prepare what I was working on I spent a solid two hours in the kitchen. As I was chopping up a head of cabbage, I remembered coming to what is now my house as a child, when my grandpa lived here. I remembered his borscht, zwiebach, monster cookies; his dusty but warm wood stove; his closet with toys in it. I remembered two years ago, having nearly 20 Goerzens here for Christmas, hosted by the boys and me, and the 3 gallons of borscht I made for the occasion. I poured in some tomato sauce, added some water. The radio was talking about being kind to people, remembering that others don t always have the advantages we do. Garrison Keillor s fictional boy in a small town, when asked what advantages he had, mentioned belonging. Yes, that is an advantage. We all deal with death, our own and that of loved ones, but I am so blessed by belonging to a loving family, two loving churches, a wonderful community. Out came three pounds of stew beef. Chop, chop, slice, plunk into the cast iron Dutch oven. It s my borscht pot. It looks as if it would be more at home over a campfire than a stovetop, but it works anywhere. Outside, the sun came up. The snow melts a little, and the cats start running around even though it s still below freezing. They look like they re having fun playing. I m chopping up parsley and an onion, then wrapping them up in a cheesecloth to make the spice ball for the borscht. I add the basil and dill, some salt, and plonk them in, too. My 6-quart pot is nearly overflowing as I carefully stir the hearty stew. On the radio, a woman who plays piano in a hospital and had dreamed of being on that particular radio program for 13 years finally was. She played with passion and delight I could hear through the radio. Then it s time to make bread. I pour in some warm water, add some brown sugar, and my thoughts turn to Home On The Range. I am reminded of this verse:
How often at night when the heavens are bright
With the light from the glittering stars
Have I stood here amazed and asked as I gazed
If their glory exceeds that of ours.
There s something about a beautiful landscape out the window to remind a person of all the blessings in life. This has been a quite busy weekend actually, a busy month but despite the fact I have a relative that is sick in the midst of it all, I am so blessed in so many ways. I finish off the bread, adding some yeast, and I remember my great uncle thanking me so much for visiting him yesterday. He commented that a lot of younger people have no use for visiting an old geezer like me. I told him, I ve never been like that. I am so glad I could come and visit you today. The best gifts are those that give in both directions, and this surely is that. Then I clean up the kitchen. I wipe down the counters from all the bits of cabbage that went flying. I put away all the herbs and spices I used, and finally go to sit down and reflect. From the kitchen, the smells of borscht and bread start to seep out, sweeping up the rest of the house. It takes at least 4 hours for the borscht to cook, and several hours for the bread, so this will be an afternoon of waiting with delicious smells. Soon my family will be home from all their activities of the day, and I will be able to greet them with a warm house and the same smells I stepped into when I was a boy. I remember this other verse from Home On the Range:
Where the air is so pure, the zephyrs so free,
The breezes so balmy and light,
That I would not exchange my home on the range
For all of the cities so bright.
Today s breeze is an icy blast from the north maybe not balmy in the conventional sense. But it is the breeze of home, the breeze of belonging. Even today, as I gaze out at the frozen landscape, I realize how balmy it really is, for I know I wouldn t exchange my life on the range for anything.

Gregor Herrmann: RC bugs 2014/45-46

I was not much at home during the last two weeks, so not much to report about RC bug activities. some general observations:
  1. the RC bug count is still relatively low, even after lucas' archive rebuild.
  2. the release team is extremely fast in handling unblock request - kudos! pro tip: file them quickly after uploading, or some thing,one else might be faster :)
my small contributions:

Bernhard R. Link: Enabling Change

Big changes are always a complicated thing to get done and can be the harder the bigger or more diverse an organization is it is taking place in. Transparency Ideally every change is well communicated early and openly. Leaving people in the dark about what will change and when means people have much less time to feeling comfortable about it or arranging with it mentally. Especially bad can be extending the change later or or shortening transition periods. Letting people think they have some time to transition only to force them to rush later will remove any credibility you have and severely reduce their ability to believe you are not crossing them. Making a new way optional is a great way to create security (see below), but making that obligatory before the change even arrives as optional with them will not make them very willing to embrace change. Take responsibility Every transformation means costs. Even if some change did only improve and did not make anything worse once implemented (the ideal change you will never meet in reality), the deployment of the change still costs: processes have adapted to it, people have to relearn how to do things, how to detect if something goes wrong, how to fix it, documentation has to be adopted and and and. Even as the change causes more good than costs in the whole organization (let's hope it does, I hope you wouldn't try to do something if the total benefit is negative), the benefits and thus the benefit to cost ratio will differ for the different parts of your organization or the different people within it. It's hardly avoidable that for some people there will not be much benefit, much less perceived benefit compared to the costs they have to burden for it. Those are the people whose good will you want to fight for, not the people you want to fight against. They have to pay with their labor/resources and thus their good will for your benefit the overall benefit. This is much easier if you acknowledge that fact. If you blame them for having the costs, claim their situation does not even exist or even ridicule them for not embracing change you only prepare yourself for frustration. You might be able to persuade yourself that everyone that is not willing to invest in the change is just acting out of malevolent self-interest. But you will hardly be able to persuade people that it is evil to not help your cause if you treat them as enemies. And once you ignored or played down costs that later actually happen, your credibility in being able to see the big picture will simply cease to exist at all for the next change. Allow different metrics People have different opinions about priorities, about what is important, about how much something costs and even about what is a problem. If you want to persuade them, try to take that into account. If you do not understand why something is a reason, it might be because the given point is stupid. But it might also be that you miss something. And often there is simple a different valuation of what is important, what the costs are and what are problems. If you want to persuade people, it is worth to try to understand those. If all you want to do is persuade some leader or some majority then ridiculing their concerns might get you somewhere. But how do you want to win people over if you do not even appear to understand their problems. Why should people trust you that their costs will be worth the overall benefits if you tell them the costs that they clearly see do not exist? How credible is referring to the bigger picture if the part of the picture they can see does not match what you say the bigger picture looks like? Don't get trolled and don't troll There will always be people that might be unreasonable or even try to provoke you. Don't allow being provoked. Remember that for successful changes you need to win broad support. Feeling personally attacked or feeling presented a large amount of pointless arguments easily results in not bringing proper responses or actually looking at arguments. If someone is only trolling and purely malevolent, they will tease you best if they bring actual concerns of people in a way you likely degrade your yourself and your point in answering. Becoming impertinent with the troll is like attacking the annoying little goblin hiding next to the city guards with area damage. When not being able to persuade people, it is also far to easy to consider them in bad faith and/or attacking them personally. This can only escalate even more. Worst case you frustrate someone in good faith. In most cases you poison the discussion so much that people actually in good faith will no longer contribute the discussion. It might be rewarding short term because after some escalation only obviously unreasonable people will talk against you, but it makes it much harder to find solutions together that could benefit anyone and almost impossible to persuade those that simply left the discussion. Give security Last but not least, remember that humans are quite risk-averse. In general they might invest in (even small) chances to win, but go a long way to avoid risks. Thus an important part of enabling change is to reduce risks, real and perceived ones and give people a feeling of security. In the end, almost every measure boils down to that: You give people security by giving them the feeling that the whole picture is considered in decisions (by bringing them early into the process, by making sure their concerns are understood and part of the global profit/cost calculation and making sure their experiences with the change are part of the evaluation). You give people security by allowing them to predict and control things (by transparency about plans, how far the change will go and guaranteed transitions periods, by giving them enough time so they can actually plan and do the transition). You give people security by avoiding early points of no return (by having wide enough tests, rollback scenarios,...). You give people security by not letting them alone (by having good documentation, availability of training, ...). Especially side-by-side availability of old and new is an extremely powerful tool, as it fits all of the above: It allows people to actually test it (and not some little prototype mostly but not quite totally unrelated to reality) so their feedback can be heard. It makes it more predictable as all the new ways can be tried before the old ones no longer work. It is the ultimate role-back scenario (just switch off the new). And allows for learning the new before losing the old. Of course giving the people a feeling of security needs resources. But it is a very powerful way to get people to embrace the chance. Also in my experience people only fearing for themselves will usually mostly be passive by not pushing forward and trying to avoid or escape the changes. (After all, working against something costs energy, so purely egoistic behavior is quite limiting in that regard). Most people actively pushing back do it because they fear for something larger than only them. And any measure to making them fear less that you ruin the overall organization, not only avoids unnecessary hurdles rolling out the change but also has some small chance to actually avoid running into disaster with closed eyes.

Vincent Bernat: Staging a Netfilter ruleset in a network namespace

A common way to build a firewall ruleset is to run a shell script calling iptables and ip6tables. This is convenient since you get access to variables and loops. There are three major drawbacks with this method:
  1. While the script is running, the firewall is temporarily incomplete. Even if existing connections can be arranged to be left untouched, the new ones may not be allowed to be established (or unauthorized flows may be allowed). Also, essential NAT rules or mangling rules may be absent.
  2. If an error occurs, you are left with an half-working firewall. Therefore, you should ensure that some rules authorizing remote access are set very early. Or implement some kind of automatic rollback system.
  3. Building a large firewall can be slow. Each ip ,6 tables command will download the ruleset from the kernel, add the rule and upload the whole modified ruleset to the kernel.

Using iptables-restore A classic way to solve these problems is to build a rule file that will be read by iptables-restore and ip6tables-restore1. Those tools send the ruleset to the kernel in one pass. The kernel applies it atomically. Usually, such a file is built with ip ,6 tables-save but a script can fit the task. The ruleset syntax understood by ip ,6 tables-restore is similar to the syntax of ip ,6 tables but each table has its own block and chain declaration is different. See the following example:
$ iptables -P FORWARD DROP
$ iptables -t nat -A POSTROUTING -s 192.168.0.0/24 -j MASQUERADE
$ iptables -N SSH
$ iptables -A SSH -p tcp --dport ssh -j ACCEPT
$ iptables -A INPUT -i lo -j ACCEPT
$ iptables -A OUTPUT -o lo -j ACCEPT
$ iptables -A FORWARD -m state --state ESTABLISHED,RELATED -j ACCEPT
$ iptables -A FORWARD -j SSH
$ iptables-save
*nat
:PREROUTING ACCEPT [0:0]
:INPUT ACCEPT [0:0]
:OUTPUT ACCEPT [0:0]
:POSTROUTING ACCEPT [0:0]
-A POSTROUTING -s 192.168.0.0/24 -j MASQUERADE
COMMIT
*filter
:INPUT ACCEPT [0:0]
:FORWARD DROP [0:0]
:OUTPUT ACCEPT [0:0]
:SSH - [0:0]
-A INPUT -i lo -j ACCEPT
-A FORWARD -m state --state RELATED,ESTABLISHED -j ACCEPT
-A FORWARD -j SSH
-A OUTPUT -o lo -j ACCEPT
-A SSH -p tcp -m tcp --dport 22 -j ACCEPT
COMMIT
As you see, we have one block for the nat table and one block for the filter table. The user-defined chain SSH is declared at the top of the filter block with other builtin chains. Here is a script diverting ip ,6 tables commands to build such a file (heavily relying on some Zsh-fu2):
#!/bin/zsh
set -e
work=$(mktemp -d)
trap "rm -rf $work" EXIT
#   Redefine ip ,6 tables
iptables()  
    # Intercept -t
    local table="filter"
    [[ -n $ @[(r)-t]  ]] &&  
        # Which table?
        local index=$ (k)@[(r)-t] 
        table=$ @[(( index + 1 ))] 
        argv=( $argv[1,(( $index - 1 ))] $argv[(( $index + 2 )),$#] )
     
    [[ -n $ @[(r)-N]  ]] &&  
        # New user chain
        local index=$ (k)@[(r)-N] 
        local chain=$ @[(( index + 1 ))] 
        print ":$ chain  -" >> $ work /$ 0 -$ table -userchains
        return
     
    [[ -n $ @[(r)-P]  ]] &&  
        # Policy for a builtin chain
        local index=$ (k)@[(r)-P] 
        local chain=$ @[(( index + 1 ))] 
        local policy=$ @[(( index + 2 ))] 
        print ":$ chain  $ policy " >> $ work /$ 0 -$ table -policy
        return
     
    # iptables-restore only handle double quotes
    echo $ $ (q-)@ //\'/\"  >> $ work /$ 0 -$ table -rules #'
 
functions[ip6tables]=$ functions[iptables] 
#   Build the final ruleset that can be parsed by ip ,6 tables-restore
save()  
    for table ($ work /$ 1 -*-rules(:t:s/-rules//))  
        print "*$ $ table #$ 1 - "
        [ ! -f $ work /$ table -policy ]   cat $ work /$ table -policy
        [ ! -f $ work /$ table -userchains   cat $ work /$ table -userchains
        cat $ work /$ table -rules
        print "COMMIT"
     
 
#   Execute rule files
for rule in $(run-parts --list --regex '^[.a-zA-Z0-9_-]+$' $ 0%/* /rules); do
    . $rule
done
#   Execute rule files
ret=0
save iptables    iptables-restore    ret=$?
save ip6tables   ip6tables-restore   ret=$?
exit $ret
In , a new iptables() function is defined and will shadow the iptables command. It will try to locate the -t parameter to know which table should be used. If such a parameter exists, the table is remembered in the $table variable and removed from the list of arguments. Defining a new chain (with -N) is also handled as well as setting the policy (with -P). In , the save() function will output a ruleset that should be parseable by ip ,6 tables-restore. In , user rules are executed. Each ip ,6 tables command will call the previously defined function. When no error has occurred, in , ip ,6 tables-restore is invoked. The command will either succeed or fail. This method works just fine3. However, the second method is more elegant.

Using a network namespace An hybrid approach is to build the firewall rules with ip ,6 tables in a newly created network namespace, save it with ip ,6 tables-save and apply it in the main namespace with ip ,6 tables-restore. Here is the gist (still using Zsh syntax):
#!/bin/zsh
set -e
alias main='/bin/true  '
[ -n $iptables ]    
    #   Execute ourself in a dedicated network namespace
    iptables=1 unshare --net -- \
        $0 4> >(iptables-restore) 6> >(ip6tables-restore)
    #   In main namespace, disable iptables/ip6tables commands
    alias iptables=/bin/true
    alias ip6tables=/bin/true
    alias main='/bin/false  '
 
#   In both namespaces, execute rule files
for rule in $(run-parts --list --regex '^[.a-zA-Z0-9_-]+$' $ 0%/* /rules); do
    . $rule
done
#   In test namespace, save the rules
[ -z $iptables ]    
    iptables-save >&4
    ip6tables-save >&6
 
In , the current script is executed in a new network namespace. Such a namespace has its own ruleset that can be modified without altering the one in the main namespace. The $iptables environment variable tell in which namespace we are. In the new namespace, we execute all the rule files ( ). They contain classic ip ,6 tables commands. If an error occurs, we stop here and nothing happens, thanks to the use of set -e. Otherwise, in , the ruleset of the new namespace are saved using ip ,6 tables-save and sent to dedicated file descriptors. Now, the execution in the main namespace resumes in . The results of ip ,6 tables-save are feeded to ip ,6 tables-restore. At this point, the firewall is mostly operational. However, we will play again the rule files ( ) but the ip ,6 tables commands will be disabled ( ). Additional commands in the rule files, like enabling IP forwarding, will be executed. The new namespace does not provide the same environment as the main namespace. For example, there is no network interface in it, so we cannot get or set IP addresses. A command that must not be executed in the new namespace should be prefixed by main:
main ip addr add 192.168.15.1/24 dev lan-guest
You can look at a complete example on GitHub.

  1. Another nifty tool is iptables-apply which will apply a rule file and rollback after a given timeout unless the change is confirmed by the user.
  2. As you can see in the snippet, Zsh comes with some powerful features to handle arrays. Another big advantage of Zsh is it does not require quoting every variable to avoid field splitting. Hence, the script can handle values with spaces without a problem, making it far more robust.
  3. If I were nitpicking, there are three small flaws with it. First, when an error occurs, it can be difficult to match the appropriate location in your script since you get the position in the ruleset instead. Second, a table can be used before it is defined. So, it may be difficult to spot some copy/paste errors. Third, the IPv4 firewall may fail while the IPv6 firewall is applied, and vice-versa. Those flaws are not present in the next method.

Vincent Bernat: Intel Wireless 7260 as an access point

My home router acts as an access point with an Intel Dual-Band Wireless-AC 7260 wireless card. This card supports 802.11ac (on the 5 GHz band) and 802.11n (on both the 5 GHz and 2.4 GHz band). While this seems a very decent card to use in managed mode, this is not really a great choice for an access point.
$ lspci -k -nn -d 8086:08b1
03:00.0 Network controller [0280]: Intel Corporation Wireless 7260 [8086:08b1] (rev 73)
        Subsystem: Intel Corporation Dual Band Wireless-AC 7260 [8086:4070]
        Kernel driver in use: iwlwifi
TL;DR: Use an Atheros card instead.

Limitations First, the card is said dual-band but you can only uses one band at a time because there is only one radio. Almost all wireless cards have this limitation. If you want to use both the 2.4 GHz band and the less crowded 5 GHz band, two cards are usually needed.

5 GHz band There is no support to set an access point on the 5 GHz band. The firmware doesn t allow it. This can be checked with iw:
$ iw reg get
country CH: DFS-ETSI
        (2402 - 2482 @ 40), (N/A, 20), (N/A)
        (5170 - 5250 @ 80), (N/A, 20), (N/A)
        (5250 - 5330 @ 80), (N/A, 20), (0 ms), DFS
        (5490 - 5710 @ 80), (N/A, 27), (0 ms), DFS
        (57240 - 65880 @ 2160), (N/A, 40), (N/A), NO-OUTDOOR
$ iw list
Wiphy phy0
[...]
        Band 2:
                Capabilities: 0x11e2
                        HT20/HT40
                        Static SM Power Save
                        RX HT20 SGI
                        RX HT40 SGI
                        TX STBC
                        RX STBC 1-stream
                        Max AMSDU length: 3839 bytes
                        DSSS/CCK HT40
                Frequencies:
                        * 5180 MHz [36] (20.0 dBm) (no IR)
                        * 5200 MHz [40] (20.0 dBm) (no IR)
                        * 5220 MHz [44] (20.0 dBm) (no IR)
                        * 5240 MHz [48] (20.0 dBm) (no IR)
                        * 5260 MHz [52] (20.0 dBm) (no IR, radar detection)
                          DFS state: usable (for 192 sec)
                          DFS CAC time: 60000 ms
                        * 5280 MHz [56] (20.0 dBm) (no IR, radar detection)
                          DFS state: usable (for 192 sec)
                          DFS CAC time: 60000 ms
[...]
While the 5 GHz band is allowed by the CRDA, all frequencies are marked with no IR. Here is the explanation for this flag:
The no-ir flag exists to allow regulatory domain definitions to disallow a device from initiating radiation of any kind and that includes using beacons, so for example AP/IBSS/Mesh/GO interfaces would not be able to initiate communication on these channels unless the channel does not have this flag.

Multiple SSID This card can only advertise one SSID. Managing several of them is useful to setup distinct wireless networks, like a public access (routed to Tor), a guest access and a private access. iw can confirm this:
$ iw list
        valid interface combinations:
                 * #  managed   <= 1, #  AP, P2P-client, P2P-GO   <= 1, #  P2P-device   <= 1,
                   total <= 3, #channels <= 1
Here is the output of an Atheros card able to manage 8 SSID:
$ iw list
        valid interface combinations:
                 * #  managed, WDS, P2P-client   <= 2048, #  IBSS, AP, mesg point, P2P-GO   <= 8,
                   total <= 2048, #channels <= 1

Configuration as an access point Except for those two limitations, the card works fine as an access point. Here is the configuration that I use for hostapd:
interface=wlan-guest
driver=nl80211
# Radio
ssid=XXXXXXXXX
hw_mode=g
channel=11
# 802.11n
wmm_enabled=1
ieee80211n=1
ht_capab=[HT40-][SHORT-GI-20][SHORT-GI-40][DSSS_CCK-40][DSSS_CCK-40][DSSS_CCK-40]
# WPA
auth_algs=1
wpa=2
wpa_passphrase=XXXXXXXXXXXXXXX
wpa_key_mgmt=WPA-PSK
wpa_pairwise=TKIP
rsn_pairwise=CCMP
Because of the use of channel 11, only 802.11n HT40- rate can be enabled. Look at the Wikipedia page for 802.11n to check if you can use either HT40-, HT40+ or both.

Vincent Bernat: Replacing Swisscom router by a Linux box

I have recently moved to Lausanne, Switzerland. Broadband Internet access is not as cheap as in France. Free, a French ISP, is providing an FTTH access with a bandwith of 1 Gbps1 for about 38 (including TV and phone service), Swisscom is providing roughly the same service for about 200 2. Swisscom fiber access was available for my appartment and I chose the 40 Mbps contract without phone service for about 80 . Like many ISP, Swisscom provides an Internet box with an additional box for TV. I didn t unpack the TV box as I have no use for it. The Internet box comes with some nice features like the ability to setup firewall rules, a guest wireless access and some file sharing possibilities. No shell access! I have bought a small PC to act as router and replace the Internet box. I have loaded the upcoming Debian Jessie on it. You can find the whole software configuration in a GitHub repository. This blog post only covers the Swisscom-specific setup (and QoS). Have a look at those two blog posts for related topics:

Ethernet The Internet box is packed with a Siligence-branded 1000BX SFP3. This SFP receives and transmits data on the same fiber using a different wavelength for each direction. Instead of using a network card with an SFP port, I bought a Netgear GS110TP which comes with 8 gigabit copper ports and 2 fiber SFP ports. It is a cheap switch bundled with many interesting features like VLAN and LLDP. It works fine if you don t expect too much from it.

IPv4 IPv4 connectivity is provided over VLAN 10. A DHCP client is mandatory. Moreover, the DHCP vendor class identifier option (option 60) needs to be advertised. This can be done by adding the following line to /etc/dhcp/dhclient.conf when using the ISC DHCP client:
send vendor-class-identifier "100008,0001,,Debian";
The first two numbers are here to identify the service you are requesting. I suppose this can be read as requesting the Swisscom residential access service. You can put whatever you want after that. Once you get a lease, you need to use a browser to identify yourself to Swisscom on the first use.

IPv6 Swisscom provides IPv6 access through the 6rd protocol. This is a tunneling mechanism to facilitate IPv6 deployment accross an IPv4 infrastructure. This kind of tunnel is natively supported by Linux since kernel version 2.6.33. To setup IPv6, you need the base IPv6 prefix and the 6rd gateway. Some ISP are providing those values through DHCP (option 212) but this is not the case for Swisscom. The gateway is 6rd.swisscom.com and the prefix is 2a02:1200::/28. After appending the IPv4 address to the prefix, you still get 4 bits for internal subnets. Swisscom doesn t provide a fixed IPv4 address. Therefore, it is not possible to precompute the IPv6 prefix. When installed as a DHCP hook (in /etc/dhcp/dhclient-exit-hooks.d/6rd), the following script configures the tunnel:
sixrd_iface=internet6
sixrd_mtu=1472                  # This is 1500 - 20 - 8 (PPPoE header)
sixrd_ttl=64
sixrd_prefix=2a02:1200::/28     # No way to guess, just have to know it.
sixrd_br=193.5.29.1             # That's "6rd.swisscom.com"
sixrd_down()  
    ip tunnel del $ sixrd_iface    true
 
sixrd_up()  
    ipv4=$ new_ip_address:-$old_ip_address 
    sixrd_subnet=$(ruby <<EOF
require 'ipaddr'
prefix = IPAddr.new "$ sixrd_prefix ", Socket::AF_INET6
prefixlen = $ sixrd_prefix#*/ 
ipv4 = IPAddr.new "$ ipv4 ", Socket::AF_INET
ipv6 = IPAddr.new (prefix.to_i + (ipv4.to_i << (64 + 32 - prefixlen))), Socket::AF_INET6
puts ipv6
EOF
)
    # Let's configure the tunnel
    ip tunnel add $ sixrd_iface  mode sit local $ipv4 ttl $sixrd_ttl
    ip tunnel 6rd dev $ sixrd_iface  6rd-prefix $ sixrd_prefix 
    ip addr add $ sixrd_subnet 1/64 dev $ sixrd_iface 
    ip link set mtu $ sixrd_mtu  dev $ sixrd_iface 
    ip link set $ sixrd_iface  up
    ip route add default via ::$ sixrd_br  dev $ sixrd_iface 
 
case $reason in
    BOUND REBOOT)
        sixrd_down
        sixrd_up
        ;;
    RENEW REBIND)
        if [ "$new_ip_address" != "$old_ip_address" ]; then
            sixrd_down
            sixrd_up
        fi
        ;;
    STOP EXPIRE FAIL RELEASE)
        sixrd_down
        ;;
esac
The computation of the IPv6 prefix is offloaded to Ruby instead of trying to use the shell for that. Even if the ipaddr module is pretty basic , it suits the job. Swisscom is using the same MTU for all clients. Because some of them are using PPPoE, the MTU is 1472 instead of 1480. You can easily check your MTU with this handy online MTU test tool. It is not uncommon that PMTUD is broken on some parts of the Internet. While not ideal, setting up TCP MSS will alievate any problem you may run into with a MTU less than 1500:
ip6tables -t mangle -A POSTROUTING -o internet6 \
          -p tcp --tcp-flags SYN,RST SYN \
          -j TCPMSS --clamp-mss-to-pmtu

QoS UPDATED: Unfortunately, this section is incorrect, including its premise. Have a look at Dave Taht comment for more details. Once upon a time, QoS was a tacky subject. The Wonder Shaper was a common way to get a somewhat working setup. Nowadays, thanks to the work of the Bufferbloat project, there are two simple steps to get something quite good:
  1. Reduce the queue of your devices to something like 32 packets. This helps TCP to detect congestion and act accordingly while still being able to saturate a gigabit link.
    ip link set txqueuelen 32 dev lan
    ip link set txqueuelen 32 dev internet
    ip link set txqueuelen 32 dev wlan
    
  2. Change the root qdisc to fq_codel. A qdisc receives packets to be sent from the kernel and decide how packets are handled to the network card. Packets can be dropped, reordered or rate-limited. fq_codel is a queuing discipline combining fair queuing and controlled delay. Fair queuing means that all flows get an equal chance to be served. Another way to tell it is that a high-bandwidth flow won t starve the queue. Controlled delay means that the queue size will be limited to ensure the latency stays low. This is achieved by dropping packets more aggressively when the queue grows.
    tc qdisc replace dev lan root fq_codel
    tc qdisc replace dev internet root fq_codel
    tc qdisc replace dev wlan root fq_codel
    

  1. Maximum download speed is 1 Gbps, while maximum upload speed is 200 Mbps.
  2. This is the standard Vivo XL package rated at CHF 169. plus the 1 Gbps option at CHF 80. .
  3. There are two references on it: SGA 441SFP0-1Gb and OST-1000BX-S34-10DI. It transmits to the 1310 nm wave length and receives on the 1490 nm one.

Dirk Eddelbuettel: Introducing RcppAnnoy

A new package RcppAnnoy is now on CRAN. It wraps the small, fast, and lightweight C++ template header library Annoy written by Erik Bernhardsson for use at Spotify. While Annoy is setup for use by Python, RcppAnnoy offers the exact same functionality from R via Rcpp. A new page for RcppAnnoy provides some more detail, example code and further links. See a recent blog post by Erik for a performance comparison of different approximate nearest neighbours libraries for Python.

This post by Dirk Eddelbuettel originated on his Thinking inside the box blog. Please report excessive re-aggregation in third-party for-profit settings.

Jonathan Wiltshire: Getting things into Jessie (#1)

Make it easy for us to review your request The release team gets a lot of mail at this time in the cycle. Make it easy for us by:
Getting things into Jessie (#1) is a post from: jwiltshire.org.uk Flattr

15 November 2014

Jo Shields: mono-project.com Linux packages an update

It s been pointed out to me that many people aren t aware of the current status of Linux packages on mono-project.com, so I m here s a summary: Stable packages Mono 3.10.0, MonoDevelop 5.5.0.227, NuGet 2.8.1 and F# 3.1.1.26 packages are available. Plus related bits. MonoDevelop on Linux does not currently include the F# addin (there are a lot of pieces to get in place for this to work). These are built for x86-64 CentOS 7, and should be compatible with RHEL 7, openSUSE 12.3, and derivatives. I haven t set up a SUSE 1-click install file yet, but I ll do it next week if someone reminds me. They are also built for Debian 7 on i386, x86-64, and IBM zSeries processors. The same packages ought to work on Ubuntu 12.04 and above, and any derivatives of Debian or Ubuntu. Due to ABI changes, you need to add a second compatibility extension repository for Ubuntu 12.04 or 12.10 to get anything to work, and a different compatibility extension repository for Debian derivatives with Apache 2.4 if you want the mod-mono ASP.NET Apache module (Debian 8+, Ubuntu 13.10+, and derivatives, will need this).
MonoDevelop 5.5 on Ubuntu 14.04

MonoDevelop 5.5 on Ubuntu 14.04

In general, see the install guide to get these going. Docker You may have seen Microsoft recently posting a guide to using ASP.NET 5 on Docker. Close inspection would show that this Docker image is based on our shiny new Xamarin Mono docker image, which is based on Debian 7.The full details are on Docker Hub, but the short version is docker pull mono:latest gets you an image with the very latest Mono.
directhex@desire:~$ docker pull mono:latest
Pulling repository mono
9da8fc8d2ff5: Download complete 
511136ea3c5a: Download complete 
f10807909bc5: Download complete 
f6fab3b798be: Download complete 
3c43ebb7883b: Download complete 
7a1f8e485667: Download complete 
a342319da8ea: Download complete 
3774d7ea06a6: Download complete 
directhex@desire:~$ docker run -i -t mono:latest mono --version 
Mono JIT compiler version 3.10.0 (tarball Wed Nov  5 12:50:04 UTC 2014)
Copyright (C) 2002-2014 Novell, Inc, Xamarin Inc and Contributors. www.mono-project.com
	TLS:           __thread
	SIGSEGV:       altstack
	Notifications: epoll
	Architecture:  amd64
	Disabled:      none
	Misc:          softdebug 
	LLVM:          supported, not enabled.
	GC:            sgen
The Dockerfiles are on GitHub.

Andrew Cater: Formal key transitiion to 4096 bit key

Following mini-Debconf and submitting my key to keyring-maint, here's a copy of the note marking the transition. I do retain a copy of the old key: it has not been compromised or revoked (until I'm sure my new key reaches the Debian keyring) and my vote in the GR is validly signed with the old key.

Date: Wed, 12 Nov 2014 08:11:53 +0000
From: "Andrew M.A. Cater"
To: keyring@rt.debian.org
Subject: Debian RT - new key for amacater
User-Agent: Mutt/1.5.23 (2014-03-12)

-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA1

pub 1024D/E93ADE7B 2001-07-04
Key fingerprint = F3FA 2752 1327 7904 846D C0DE 3233 C127 E93A DE7B
uid Andrew Cater (Andrew M.A. Cater)
sub 1024g/E8C8CC00 2001-07-04

pub 4096R/22EF1F0F 2014-08-29
Key fingerprint = 5596 5E39 93E0 6E2B 5BA5 CD84 4AA8 FC24 22EF 1F0F
uid Andrew M.A. Cater (Andy Cater)
uid Andrew M.A. Cater (non-Debian email)
sub 4096R/923AB77E 2014-08-29


This is intended to replace the old key by the new key as part of a key transition from old, insecure keys

All the best,

AndyC
-----BEGIN PGP SIGNATURE-----
Version: GnuPG v1

iEYEARECAAYFAlRipvgACgkQMjPBJ+k63nvaQACeM9OpQsFb2qzsmNRPH6fwLh5M
zhIAn19XSkKYF85Tj2kvuC5wl7PVSYPS

This because Google (and Planet Debian) are more reliable than my email inbox.

[Keys exchanged at the mini-Debconf have now been signed with the new 4096 bit key]

AndyC

Don Armstrong: Adding a newcomer ( ) tag to the BTS

Some of you may already be aware of the gift tag which has been used for a while to indicate bugs which are suitable for new contributors to use as an entry point to working on specific packages. Unfortunately, some of us (including me!) were unaware that this tag even existed. Luckily, Lucas Nussbaum clued me in to the existence of this tag, and after a brief bike-shed-naming thread, and some voting using pocket_devotee we decided to name the new tag newcomer, and I have now added this tag to the BTS documentation, and tagged all of the bugs which were user tagged "gift" with this tag. If you have bugs in your package which you think are ideal for new contributors to Debian (or your package) to fix, please tag them newcomer. If you're getting started in Debian, and working on bugs to fix, please search for the newcomer tag, grab the helm, and contribute to Debian.

Don Armstrong: Virginia King selected for Debbugs FOSS Outreach Program for Women

I'm glad to announce that Virginia King has been selected as one of the three interns for this round of the FOSS Outreach Program for women. Starting December 9th, and continuing until March 9th, she'll be working on improving the documentation of Debian's bug tracking system. The initial goal is to develop a Bug Triager Howto to help new contributors to Debian jump in and help existing teams triage bugs. We'll be getting in touch with some of the larger teams in Debian to help make this document as useful as possible. If you're a member of a team in Debian who would like this howto to address your specific workflow, please drop me an e-mail, and we'll keep you in the loop. The secondary goals for this project are to:

14 November 2014

Richard Hartmann: Release Critical Bug report for Week 46

I know I promised better stats, but meh... Next week :( As you can see, there's been a bit of a mass-filing going on. and that pushed ys above Wheezy's count for week 46. My own personal favourite bug is, of course, this one. The UDD bugs interface currently knows about the following release critical bugs: How do we compare to the Squeeze release cycle?
Week Squeeze Wheezy Diff
43 284 (213+71) 468 (332+136) +184 (+119/+65)
44 261 (201+60) 408 (265+143) +147 (+64/+83)
45 261 (205+56) 425 (291+134) +164 (+86/+78)
46 271 (200+71) 401 (258+143) +130 (+58/+72)
47 283 (209+74) 366 (221+145) +83 (+12/+71)
48 256 (177+79) 378 (230+148) +122 (+53/+69)
49 256 (180+76) 360 (216+155) +104 (+36/+79)
50 204 (148+56) 339 (195+144) +135 (+47/+90)
51 178 (124+54) 323 (190+133) +145 (+66/+79)
52 115 (78+37) 289 (190+99) +174 (+112/+62)
1 93 (60+33) 287 (171+116) +194 (+111/+83)
2 82 (46+36) 271 (162+109) +189 (+116/+73)
3 25 (15+10) 249 (165+84) +224 (+150/+74)
4 14 (8+6) 244 (176+68) +230 (+168/+62)
5 2 (0+2) 224 (132+92) +222 (+132/+90)
6 release! 212 (129+83) +212 (+129/+83)
7 release+1 194 (128+66) +194 (+128/+66)
8 release+2 206 (144+62) +206 (+144/+62)
9 release+3 174 (105+69) +174 (+105/+69)
10 release+4 120 (72+48) +120 (+72/+48)
11 release+5 115 (74+41) +115 (+74/+41)
12 release+6 93 (47+46) +93 (+47/+46)
13 release+7 50 (24+26) +50 (+24/+26)
14 release+8 51 (32+19) +51 (+32/+19)
15 release+9 39 (32+7) +39 (+32/+7)
16 release+10 20 (12+8) +20 (+12/+8)
17 release+11 24 (19+5) +24 (+19/+5)
18 release+12 2 (2+0) +2 (+2/+0)
Graphical overview of bug stats thanks to azhag:

Debian Med: Bits from Debian Med team (by Andreas Tille)

New set of metapackagesThe version number of debian-med metapackages was bumped to 1.99 as a signal that we plan to release version 2.0 with Jessie. As usual the metapackages will be recreated shortly before the final release to include potential changes in the package pool. Feel free to install the metapackages med-* with the package installer of your choice. As always you can have a look at the packages in our focus by visiting our tasks pages. Please note that there may be new packages that aren t ready for release and that won t be installed by using the current metapackages. This is because we don t stop packaging software when the current testing is in freeze. Some support for Hospital Information SystemsThis release contains, for the first time some support for Hospital Information Systems (HIS) with the dependency fis-gtm of the med-his metapackage. This was made possible due to the work of Luis Ibanez (at kitware at the time when working on the packaging) and Amul Shah (fisglobal). Thanks to a fruitful cooperation between upstream FIS and Debian the build system of fis-gtm was adapted to enable an easier packaging. The availability of fis-gtm will simplify running Vista-foia on Debian systems and we are finally working on packaging Vista as well to make Debian fit for running inside hospitals. There was some interesting work done by Emilien Klein who was working hard to get GNUHealthpackaged. Emilien has given a detailed explanation on the Debian Med mailing list giving reasons why he removed the existing packages from the Debian package pool again. While this is a shame for GNUHealth users there might be an opportunity to revive this effort if there was better coordination between upstream and Tryton (which is the framework GNUHealth is based upon). In any case the packaging code in SVN as a useful resource to base private packages on. Feel free to contact us via the Debian Med mailing list if you consider creating GNUHealth Debian packages. Packages moved from non-free to mainThe Debian Med team worked hard to finally enable DFSG free licenses for PHYLIPand other package based on this tool. PHYLIP is well known in bioinformatics and actually one of the first packages in this field inside Debian (oldest changelog entry 28 Aug 1998). Since then it was considered non-free because its use was restricted to scientific / non-commercial use and also has the condition that you need to pay a fee to the University of Washington if you intend to use it commercially. Since Debian Med was started we were in continuous discussion with the author Joe Felsenstein. We even started an online petition to show how large the interest in a DFSG free PHYLIP might be. As a side note: This petition was *not* presented to the authors since they happily decided to move to a free license because of previous discussion and since they realised that the money they "gained" over they years was only minimal. The petition is mentioned here to demonstrate that it is possible to gather support to see positive changes implemented that benefit all users and that this approach can be used for similar cases. So finally PHYLIP was released in September under a BSD-2-clause license and in turn SeaView (a similarly famous program and also long term non-free citizen) depending on PHYLIP code was freed as well. There are several other tools like python-biopython and python-cogent which are calling PHYLIP if it exists. So not only is PHYLIP freed we can now stop removing those parts of the test suites of these other tools that are using PHYLIP. Thanks to all who participated in freeing PHYLIP specifically its author Joe Felsenstein. Autopkgtest in Debian Med packagesWe tried hard to add autopkgtests to all packages where some upstream test suite exists and we also tried to create some tests on our own. Since we consider testing of scientific software a very important feature this work was highly focused on for the Jessie release. When doing so we were able to drastically enhance the reliability of packages and found new formerly hidden dependency relations. Perhaps the hardest work was to run the full test suite of python-biopython which also has uncovered some hidden bugs in the upstream code on architectures that are not so frequently used in the field of bioinformatics. This was made possible by the very good support of upstream who were very helpful in solving the issues we reported. However, we are not at 100% coverage of autopkgtest and we will keep on working on our packages in the next release cycle for Jessie+1. General quality assuranceA general inspection of all Debian Med packages was done to check all packages which were uploaded before the Wheezy release and never touched since then. Those packages where checked for changed upstream locations which might have been hidden from uscan and in some cases new upstream releases were spotted by doing this investigation. Other old packages were re-uploaded conforming to current policy and packaging tools also polishing lintian issues. Publication with Debian Med involvementThe Debian Med team is involved in a paper which is in BioMed Central (in press). The title will be "Community-driven development for computational biology at Sprints, Hackathons and Codefests" Updated team metricsThe team metrics graphs on the Debian Med Blend entry page were updated. At the bottom you will find a 3D Bar chart of dependencies of selected metapackages over different versions. It shows our continuous work in several fields. Thanks to all Debian Med team members for their rigorous work on our common goal to make Debian the best operating system for medicine and biology. Please note that VCS stat calculation is currently broken and does not reflect the latest commits this year. Blends installable via d-i?In bug #758116 it is requested to list all Blends and thus also Debian Med in the initial tasksel selection. This would solve a long term open issue which was addessed more than eleven years ago (in #186085) in a more general and better way. This would add a frequently requested feature by our users who always wonder how to install Debian Med. While there is no final decision on bug #758116 and we are quite late with the request to get this implemented in Jessie feel free to contribute ideas so that this selection of Blends can be done in the best possible manner. Debian Med Bug Squashing Advent Calendar 2014The Debian Med team will again do the Bug Squashing Advent Calendar. Feel free to join us in our bug squashing effort where we close bugs while other people are opening doors. :-)

Steve McIntyre: Weird things I've noticed in hotels lately...

I've been crap about blogging lately. Let's see if I can fix that. Back in February and March, Jo and I went on vacation for 2 weeks touring California and Nevada. We had an awesome time and we got to see and do lots of fun stuff. I'm not going to go into all the details, as it's a long time ago now...! I've got a massive set of photos online, though. However, two things struck me as odd when we were there. I'm travelling quite regularly to the US these days due to my work in Linaro, but these still seemed new when I saw them this February/March. These are, admittedly trivial things, but they really stood out for me. Maybe I'm a little weird? :-) Curved shower curtain tracks curvy! I guess I'm not the only one who's been annoyed by shower curtains sticking to me in the shower, but I'd not really paid much thought to it until now. Suddenly, as of maybe 18 months ago I'm seeing most hotel bathrooms replacing the straight curtain track with a curved one, to stop that happening. This photo shows that process with both tracks visible... Waterproof/washable TV remotes shiny! This one really surprised me. As Jo will attest, I have a little bit of an obsession with TVs and set-top boxes in hotel rooms. This dates from my time working for Amino where we made set-top boxes, and I got into the habit of checking what products were in the hotels I stayed in. I've seen a range of weird and wonderful setups over the years, but never this one before. In two of the hotels on our trip, they had replaced the normal TV remotes with washable/wipe-down ones. Weird...

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