Search Results: "cas"

15 August 2020

Antonio Terceiro: Useful ffmpeg commands for editing video

For DebConf20, we are recommending that speakers pre-record the presentation part of their talks, and will have live Q&A. We had a smaller online MiniDebConf a couple of months ago, where for instance I had connectivity issues during my talk, so even though it feels too artificial, I guess pre-recording can decrease by a lot the likelihood of a given talk going bad. Paul Gevers and I submitted a short 20 min talk giving an update on autopkgtest, ci.debian.net and friends. We will provide the latest updates on autopkgtest, autodep8, debci, ci.debian.net, and its integration with the Debian testing migration software, britney. We agreed on a split of the content, each one recorded their part, and I offered to join them together. The logical chaining of the topics is such that we can't just concatenate the recordings, so we need to interlace our parts. So I set out to do a full video editing work. I have done this before, although in a simpler way, for one of the MiniDebconfs we held in Curitiba. In that case, it was just cutting the noise at the beginning and the end of the recording, and adding beginning and finish screens with sponsors logos etc. The first issue I noticed was that both our recordings had a decent amount of audio noise. To extract the audio track from the videos, I resorted to How can I extract audio from video with ffmpeg? on Stack Overflow:
ffmpeg -i input-video.avi -vn -acodec copy output-audio.aac
I then edited the audio with Audacity. I passed a noise reduction filter a couple of times, then a compressor filter to amplify my recording on mine, as Paul's already had a good volume. And those are my more advanced audio editing skills, which I acquired doing my own podcast. I now realized I could have just muted the audio tracks from the original clip and align the noise-free audio with it, but I ended up creating new video files with the clean audio. Another member of the Stack Overflow family came to the rescue, in How to merge audio and video file in ffmpeg. To replace the audio stream, we can do something like this:
ffmpeg -i video.mp4 -i audio.wav -c:v copy -c:a aac -map 0:v:0 -map 1:a:0 output.mp4
Paul's recording had a 4:3 aspect ratio, while the requested format is 16:9. This late in the game, there was zero chance I would request him to redo the recording. So I decided to add those black bars on the side to make it the right aspect when showing full screen. And yet again the quickest answer I could find came from the Stack Overflow empire: ffmpeg: pillarbox 4:3 to 16:9:
ffmpeg -i "input43.mkv" -vf "scale=640x480,setsar=1,pad=854:480:107:0" [etc..]
The final editing was done with pitivi, which is what I have used before. I'm a very basic user, but I could do what I needed. It was basically splitting the clips at the right places, inserting the slides as images and aligning them with the video, and making most our video appear small in the corner when presenting the slides. P.S.: all the command lines presented here are examples, basically copied from the linked Q&As, and have to be adapted to your actual input and output formats.

14 August 2020

Jonathan Dowland: Generic Haskell

When I did the work described earlier in template haskell, I also explored generic programming in Haskell to solve a particular problem. StrIoT is a program generator: it outputs source code, which may depend upon other modules, which need to be imported via declarations at the top of the source code files. The data structure that StrIoT manipulates contains information about what modules are loaded to resolve the names that have been used in the input code, so we can walk that structure to automatically derive an import list. The generic programming tools I used for this are from Scrap Your Boilerplate (SYB), a module written to complement a paper of the same name. In this code snippet, everything and mkQ are from SYB:
extractNames :: Data a => a -> [Name]
extractNames = everything (++) (\a -> mkQ [] f a)
     where f = (:[])
The input must be any type which implements typeclass Data, as must all its members (and their members etc.): This holds for the Template Haskell Exp types. The output is a normal list of Names. The utility function has a more specific type Name -> [Name]. This is all that's needed to walk over the heterogeneous data structures and do something specific (f) when we encounter a Name. Post-processing the Names to get a list of modules is simple
 nub . catMaybes . map nameModule . concatMap extractNames
Unfortunately, there's a weird GHC behaviour relating to the module names for some Prelude functions that makes the above less useful in practice. For example, the Prelude function words :: String -> [String] can normally be used without an explicit import (since it's a Prelude function). However, once round-tripped through a Name, it becomes GHC.OldList.words. Attempting to import GHC.OldList fails in some contexts, because it's a hidden module or package. I've been meaning to investigate further and, if necessary, file a GHC bug about this. For this reason I've scrapped all the above and gone with a different plan. We go back to requiring the user to specify their required import list explicitly. We then walk over the Exp data type prior to code generation and decanonicalize all the Names. I also use generic programming/SYB to do this:
unQualifyNames :: Exp -> Exp
unQualifyNames = everywhere (\a -> mkT f a)
     where f :: Name -> Name
           f n = if n == '(.)
            then mkName "."
            else (mkName . last . splitOn "." . pprint) n
I've had to special-case composition (.) since that code-point is also used as the delimiter between package, module and function. Otherwise this looks very similar to the earlier function, except using everywhere and mkT (make transformation) instead of everything and mkQ (make query).

Keith Packard: picolibc-news

Picolibc Updates I thought work on picolibc would slow down at some point, but I keep finding more things that need work. I spent a few weeks working in libm and then discovered some important memory allocation bugs in the last week that needed attention too. Cleaning up the Picolibc Math Library Picolibc uses the same math library sources as newlib, which includes code from a range of sources: The original SunPro math code had been split into two levels at some point:
  1. IEEE-754 functions. These offer pure IEEE-754 semantics, including return values and exceptions. They do not set the POSIX errno value. These are all prefixed with __ieee754_ and can be called directly by applications if desired.
  2. POSIX functions. These can offer POSIX semantics, including setting errno and returning expected values when errno is set.
New Code Sponsored by ARM Szabolcs Nagy and Wilco Dijkstra's work in the last few years has been to improve the performance of some of the core math functions, which is much appreciated. They've adopted a more modern coding style (C99) and written faster code at the expense of a larger memory foot print. One interesting choice was to use double computations for the float implementations of various functions. This makes these functions shorter and more accurate than versions done using float throughout. However, for machines which don't have HW double, this pulls in soft double code which adds considerable size to the resulting binary and slows down the computations, especially if the platform does support HW float. The new code also takes advantage of HW fused-multiply-add instructions. Those offer more precision than a sequence of primitive instructions, and so the new code can be much shorter as a result. The method used to detect whether the target machine supported fma operations was slightly broken on 32-bit ARM platforms, where those with 'float' fma acceleration but without 'double' fma acceleration would use the shorter code sequence, but with an emulated fma operation that used the less-precise sequence of operations, leading to significant reductions in the quality of the resulting math functions. I fixed the double fma detection and then also added float fma detection along with implementations of float and double fma for ARM and RISC-V. Now both of those platforms get fma-enhanced math functions where available. Errno Adventures I'd submitted patches to newlib a while ago that aliased the regular math library names to the __ieee754_ functions when the library was configured to not set errno, which is pretty common for embedded environments where a shared errno is a pain anyways. Note the use of the word can in remark about the old POSIX wrapper functions. That's because all of these functions are run-time switchable between _IEEE_ and _POSIX_ mode using the _LIB_VERSION global symbol. When left in the usual _IEEE_ mode, none of this extra code was ever executed, so these wrapper functions never did anything beyond what the underlying __ieee754_ functions did. The new code by Nagy and Dijkstra changed how functions are structured to eliminate the underlying IEEE-754 api. These new functions use tail calls to various __math_ error reporting functions. Those can be configured at library build time to set errno or not, centralizing those decisions in a few functions. The result of this combination of source material is that in the default configuration, some library functions (those written by Nagy and Dijkstra) would set errno and others (the old SunPro code) would not. To disable all errno references, the library would need to be compiled with a set of options, -D_IEEE_LIBM to disable errno in the SunPro code and -DWANT_ERRNO=0 to disable errno in the new code. To enable errno everywhere, you'd set -D_POSIX_MODE to make the default value for _LIB_VERSION be _POSIX_ instead of _IEEE_. To clean all of this up, I removed the run-time _LIB_VERSION variable and made that compile-time. In combination with the earlier work to alias the __ieee754_ functions to the regular POSIX names when _IEEE_LIBM was defined this means that the old SunPro POSIX functions now only get used when _IEEE_LIBM is not defined, and in that case the _LIB_VERSION tests always force use of the errno setting code. In addition, I made the value of WANT_ERRNO depend on whether _IEEE_LIBM was defined, so now a single definition (-D_IEEE_LIBM) causes all of the errno handling from libm to be removed, independent of which code is in use. As part of this work, I added a range of errno tests for the math functions to find places where the wrong errno value was being used. Exceptions As an alternative to errno, C also provides for IEEE-754 exceptions through the fenv functions. These have some significant advantages, including having independent bits for each exception type and having them accumulate instead of sharing errno with a huge range of other C library functions. Plus, they're generally implemented in hardware, so you get exceptions for both library functions and primitive operations. Well, you should get exceptions everywhere, except that the GCC soft float libraries don't support them at all. So, errno can still be useful if you need to know what happened in your library functions when using soft floats. Newlib has recently seen a spate of fenv support being added for various architectures, so I decided that it would be a good idea to add some tests. I added tests for both primitive operations, and then tests for library functions to check both exceptions and errno values. Oddly, this uncovered a range of minor mistakes in various math functions. Lots of these were mistakes in the SunPro POSIX wrapper functions where they modified the return values from the __ieee754_ implementations. Simply removing those value modifications fixed many of those errors. Fixing Memory Allocator bugs Picolibc inherits malloc code from newlib which offers two separate implementations, one big and fast, the other small and slow(er). Selecting between them is done while building the library, and as Picolibc is expected to be used on smaller systems, the small and slow one is the default. Contributed by someone from ARM back in 2012/2013, nano-mallocr reminds me of the old V7 memory allocator. A linked list, sorted in address order, holds discontiguous chunks of available memory. Allocation is done by searching for a large enough chunk in the list. The first one large enough is selected, and if it is large enough, a chunk is split off and left on the free list while the remainder is handed to the application. When the list doesn't have any chunk large enough, sbrk is called to get more memory. Free operations involve walking the list and inserting the chunk in the right location, merging the freed memory with any immediately adjacent chunks to reduce fragmentation. The size of each chunk is stored just before the first byte of memory used by the application, where it remains while the memory is in use and while on the free list. The free list is formed by pointers stored in the active area of the chunk, so the only overhead for chunks in use is the size field. Something Something Padding To deal with the vagaries of alignment, the original nano-mallocr code would allow for there to be 'padding' between the size field and the active memory area. The amount of padding could vary, depending on the alignment required for a particular chunk (in the case of memalign, that padding can be quite large). If present, nano-mallocr would store the padding value in the location immediately before the active area and distinguish that from a regular size field by a negative sign. The whole padding thing seems mysterious to me -- why would it ever be needed when the allocator could simply create chunks that were aligned to the required value and a multiple of that value in size. The only use I could think of was for memalign; adding this padding field would allow for less over-allocation to find a suitable chunk. I didn't feel like this one (infrequent) use case was worth the extra complexity; it certainly caused me difficulty in reading the code. A Few Bugs In reviewing the code, I found a couple of easy-to-fix bugs. Time For Testing Once I had uncovered a few bugs in this code, I decided that it would be good to write a few tests to exercise the API. With the tests running on four architectures in nearly 60 variants, it seemed like I'd be able to uncover at least a few more failures: These new tests did find bugs. But not where I expected them. Which is why I'm so fond of testing. GCC Optimizations One of my tests was to call calloc and make sure it returned a chunk of memory that appeared to work or failed with a reasonable value. To my surprise, on aarch64, that test never finished. It worked elsewhere, but on that architecture it hung in the middle of calloc itself. Which looked like this:
void * nano_calloc(malloc_size_t n, malloc_size_t elem)
 
    ptrdiff_t bytes;
    void * mem;
    if (__builtin_mul_overflow (n, elem, &bytes))
     
    RERRNO = ENOMEM;
    return NULL;
     
    mem = nano_malloc(bytes);
    if (mem != NULL) memset(mem, 0, bytes);
    return mem;
 
Note the naming here -- nano_mallocr uses nano_ prefixes in the code, but then uses #defines to change their names to those expected in the ABI. (No, I don't understand why either). However, GCC sees the real names and has some idea of what these functions are supposed to do. In particular, the pattern:
foo = malloc(n);
if (foo) memset(foo, '\0', n);
is converted into a shorter and semantically equivalent:
foo = calloc(n, 1);
Alas, GCC doesn't take into account that this optimization is occurring inside of the implementation of calloc. Another sequence of code looked like this:
chunk->size = foo
nano_free((char *) chunk + CHUNK_OFFSET);
Well, GCC knows that the content of memory passed to free cannot affect the operation of the application, and so it converted this into:
nano_free((char *) chunk + CHUNK_OFFSET);
Remember that nano_mallocr stores the size of the chunk just before the active memory. In this case, nano_mallocr was splitting a large chunk into two pieces, setting the size of the left-over part and placing that on the free list. Failing to set that size value left whatever was there before for the size and usually resulted in the free list becoming quite corrupted. Both of these problems can be corrected by compiling the code with a couple of GCC command-line switches (-fno-builtin-malloc and -fno-builtin-free). Reworking Malloc Having spent this much time reading through the nano_mallocr code, I decided to just go through it and make it easier for me to read today, hoping that other people (which includes 'future me') will also find it a bit easier to follow. I picked a couple of things to focus on:
  1. All newly allocated memory should be cleared. This reduces information disclosure between whatever code freed the memory and whatever code is about to use the memory. Plus, it reduces the effect of un-initialized allocations as they now consistently get zeroed memory. Yes, this masks bugs. Yes, this goes slower. This change is dedicated to Kees Cook, but please blame me for it not him.
  2. Get rid of the 'Padding' notion. Every time I read this code it made my brain hurt. I doubt I'll get any smarter in the future.
  3. Realloc could use some love, improving its efficiency in common cases to reduce memory usage.
  4. Reworking linked list walking. nano_mallocr uses a singly-linked free list and open-codes all list walking. Normally, I'd switch to a library implementation to avoid introducing my own bugs, but in this fairly simple case, I think it's a reasonable compromise to open-code the list operations using some patterns I learned while working at MIT from Bob Scheifler.
  5. Discover necessary values, like padding and the limits of the memory space, from the environment rather than having them hard-coded.
Padding To get rid of 'Padding' in malloc, I needed to make sure that every chunk was aligned and sized correctly. Remember that there is a header on every allocated chunk which is stored before the active memory which contains the size of the chunk. On 32-bit machines, that size is 4 bytes. If the machine requires allocations to be aligned on 8-byte boundaries (as might be the case for 'double' values), we're now going to force the alignment of the header to 8-bytes, wasting four bytes between the size field and the active memory. Well, the existing nano_mallocr code also wastes those four bytes to store the 'padding' value. Using a consistent alignment for chunk starting addresses and chunk sizes has made the code a lot simpler and easier to reason about while not using extra memory for normal allocation. Except for memalign, which I'll cover in the next section. realloc The original nano_realloc function was as simple as possible:
mem = nano_malloc(new_size);
if (mem)  
    memcpy(mem, old, MIN(old_size, new_size));
    nano_free(old);
 
return mem;
However, this really performs badly when the application is growing a buffer while accumulating data. A couple of simple optimizations occurred to me:
  1. If there's a free chunk just after the original location, it could be merged to the existing block and avoid copying the data.
  2. If the original chunk is at the end of the heap, call sbrk() to increase the size of the chunk.
The second one seems like the more important case; in a small system, the buffer will probably land at the end of the heap at some point, at which point growing it to the size of available memory becomes quite efficient. When shrinking the buffer, instead of allocating new space and copying, if there's enough space being freed for a new chunk, create one and add it to the free list. List Walking Walking singly-linked lists seem like one of the first things we see when learning pointer manipulation in C:
for (element = head; element; element = element->next)
    do stuff ...
However, this becomes pretty complicated when 'do stuff' includes removing something from the list:
prev = NULL;
for (element = head; element; element = element->next)
    ...
    if (found)
        break;
    ...
    prev = element
if (prev != NULL)
    prev->next = element->next;
else
    head = element->next;
An extra variable, and a test to figure out how to re-link the list. Bob showed me a simpler way, which I'm sure many people are familiar with:
for (ptr = &head; (element = *ptr); ptr = &(element->next))
    ...
    if (found)
        break;
*ptr = element->next;
Insertion is similar, as you would expect:
for (ptr = &head; (element = *ptr); ptr = &(element->next))
    if (found)
        break;
new_element->next = element;
*ptr = new_element;
In terms of memory operations, it's the same -- each 'next' pointer is fetched exactly once and the list is re-linked by performing a single store. In terms of reading the code, once you've seen this pattern, getting rid of the extra variable and the conditionals around the list update makes it shorter and less prone to errors. In the nano_mallocr code, instead of using 'prev = NULL', it actually used 'prev = free_list', and the test for updating the head was 'prev == element', which really caught me unawares. System Parameters Any malloc implementation needs to know a couple of things about the system it's running on:
  1. Address space. The maximum range of possible addresses sets the limit on how large a block of memory might be allocated, and hence the size of the 'size' field. Fortunately, we've got the 'size_t' type for this, so we can just use that.
  2. Alignment requirements. These derive from the alignment requirements of the basic machine types, including pointers, integers and floating point numbers which are formed from a combination of machine requirements (some systems will fault if attempting to use memory with the wrong alignment) along with a compromise between memory usage and memory system performance.
I decided to let the system tell me the alignment necessary using a special type declaration and the 'offsetof' operation:
typedef struct  
    char c;
    union  
    void *p;
    double d;
    long long ll;
    size_t s;
      u;
  align_t;
#define MALLOC_ALIGN        (offsetof(align_t, u))
Because C requires struct fields to be stored in order of declaration, the 'u' field would have to be after the 'c' field, and would have to be assigned an offset equal to the largest alignment necessary for any of its members. Testing on a range of machines yields the following alignment requirements:
Architecture Alignment
x86_64 8
RISC-V 8
aarch64 8
arm 8
x86 4
So, I guess I could have just used a constant value of '8' and not worried about it, but using the compiler-provided value means that running picolibc on older architectures might save a bit of memory at no real cost in the code. Now, the header containing the 'size' field can be aligned to this value, and all allocated blocks can be allocated in units of this value. memalign memalign, valloc and pvalloc all allocate memory with restrictions on the alignment of the base address and length. You'd think these would be simple -- allocate a large chunk, align within that chunk and return the address. However, they also all require that the address can be successfully passed to free. Which means that the allocator needs to do some tricks to make it all work. Essentially, you allocate 'lots' of memory and then arrange that any bytes at the head and tail of the allocation can be returned to the free list. The tail part is easy; if it's large enough to form a free chunk (which must contain the size and a 'next' pointer for the free list), it can be split off. Otherwise, it just sits at the end of the allocation being wasted space. The head part is a bit tricky when it's not large enough to form a free chunk. That's where the 'padding' business came in handy; that can be as small as a 'size_t' value, which (on 32-bit systems) is only four bytes. Now that we're giving up trying to reason about 'padding', any extra block at the start must be big enough to hold a free block, which includes the size and a next pointer. On 32-bit systems, that's just 8 bytes which (for most of our targets) is the same as the alignment value we're using. On 32-bit systems that can use 4-byte alignment, and on 64-bit systems, it's possible that the alignment required by the application for memalign and the alignment of a chunk returned by malloc might be off by too small an amount to create a free chunk. So, we just allocate a lot of extra space; enough so that we can create a block of size 'toosmall + align' at the start and create a free chunk of memory out of that. This works, and at least returns all of the unused memory back for other allocations. Sending Patches Back to Newlib I've sent the floating point fixes upstream to newlib where they've already landed on master. I've sent most of the malloc fixes, but I'm not sure they really care about seeing nano_mallocr refactored. If they do, I'll spend the time necessary to get the changes ported back to the newlib internal APIs and merged upstream.

John Goerzen: In Which COVID-19 Misinformation Leads To A Bunch of Graphs Made With Rust

A funny and by funny, I mean sad thing has happened. Recently the Kansas Department of Health and Environment (KDHE) has been analyzing data from the patchwork implementation of mask requirements in Kansas. They came to a conclusion that shouldn t be surprising to anyone: masks help. They published a chart showing this. A right-wing propaganda publication got ahold of this, and claimed the numbers were doctored because there were two-different Y-axes. I set about to analyze the data myself from public sources, and produced graphs of various kinds using a single Y-axis and supporting the idea that the graphs were not, in fact, doctored. Here s one graph that s showing that:
In order to do that, I had imported COVID-19 data from various public sources. Many states in the US are large enough to have significant variation in COVID-19 conditions, and many of the source people look at don t show county-level data over time. I wanted to do that. Eventually, I wrote covid19db, which ingests data from a number of public sources and generates a SQLite database file. Using Github Actions, this file is automatically updated every morning and available for download. Or, you can download the code and generate a database yourself locally. Then, I wrote covid19ks, which generates various pretty graphs covering the data. These graphs, incidentally, turn out to highlight just how poorly the United States is doing compared to the rest of the industrialized world. I hope that these resources, and especially covid19db, might be useful to others that would like to analyze the data. The code isn t the prettiest since it was done in a hurry, but I think that functionally this is useful.

13 August 2020

Sven Hoexter: An Average IT Org

Supply chain attacks are a known issue, and also lately there was a discussion around the relevance of reproducible builds. Looking in comparison at an average IT org doing something with the internet, I believe the pressing problem is neither supply chain attacks nor a lack of reproducible builds. The real problem is the amount of prefabricated binaries supplied by someone else, created in an unknown build environment with unknown tools, the average IT org requires to do anything. The Mess the World Runs on By chance I had an opportunity to look at what some other people I know use, and here is the list I could compile by scratching just at the surface: Of course there are also all the script language repos - Python, Ruby, Node/Typescript - around as well. Looking at myself, who's working in a different IT org but with a similar focus, I have the following lingering around on my for work laptop and retrieved it as a binary from a 3rd party: Yes some of that is even non-free and might contain spyw^telemetry. Takeway I By guessing based on Pareto Principle probably 80% of the software mentioned above is also open source software. But, and here we leave Pareto behind, close to none is build by the average IT org from source. Why should the average IT org care about advanced issues like supply chain attacks on source code and mitigations, when it already gets into very hot water the day DockerHub closes down, HashiCorp moves from open core to full proprietary or Elastic decides to no longer offer free binary builds? The reality out there seems to be that infrastructure of "modern" IT orgs is managed similar to the Windows 95 installation of my childhood. You just grab running binaries from somewhere and run them. The main difference seems to be that you no longer have the inconvenience of downloading a .xls from geocities you've to rename to .rar and that it's legal. Takeway II In the end the binary supply is like a drug for the user, and somehow the Debian project is also just another dealer / middle man in this setup. There are probably a lot of open questions to think about in that context. Are we the better dealer because we care about signed sources we retrieve from upstream and because we engage in reproducible build projects? Are our own means of distributing binaries any better than a binary download from github via https with a manual checksum verification, or the Debian repo at download.docker.com? Is the approach of the BSD/Gentoo ports, where you have to compile at least some software from source, the better one? Do I really want to know how some of the software is actually build? Or some more candid ones like is gnutls a good choice for the https support in apt and how solid is the gnupg code base? Update: Regarding apt there seems to be some movement.

12 August 2020

Michael Stapelberg: Linux distributions: Can we do without hooks and triggers?

Hooks are an extension feature provided by all package managers that are used in larger Linux distributions. For example, Debian uses apt, which has various maintainer scripts. Fedora uses rpm, which has scriptlets. Different package managers use different names for the concept, but all of them offer package maintainers the ability to run arbitrary code during package installation and upgrades. Example hook use cases include adding daemon user accounts to your system (e.g. postgres), or generating/updating cache files. Triggers are a kind of hook which run when other packages are installed. For example, on Debian, the man(1) package comes with a trigger which regenerates the search database index whenever any package installs a manpage. When, for example, the nginx(8) package is installed, a trigger provided by the man(1) package runs. Over the past few decades, Open Source software has become more and more uniform: instead of each piece of software defining its own rules, a small number of build systems are now widely adopted. Hence, I think it makes sense to revisit whether offering extension via hooks and triggers is a net win or net loss.

Hooks preclude concurrent package installation Package managers commonly can make very little assumptions about what hooks do, what preconditions they require, and which conflicts might be caused by running multiple package s hooks concurrently. Hence, package managers cannot concurrently install packages. At least the hook/trigger part of the installation needs to happen in sequence. While it seems technically feasible to retrofit package manager hooks with concurrency primitives such as locks for mutual exclusion between different hook processes, the required overhaul of all hooks seems like such a daunting task that it might be better to just get rid of the hooks instead. Only deleting code frees you from the burden of maintenance, automated testing and debugging. In Debian, there are 8620 non-generated maintainer scripts, as reported by find shard*/src/*/debian -regex ".*\(pre\ post\)\(inst\ rm\)$" on a Debian Code Search instance.

Triggers slow down installing/updating other packages Personally, I never use the apropos(1) command, so I don t appreciate the man(1) package s trigger which updates the database used by apropos(1). The process takes a long time and, because hooks and triggers must be executed serially (see previous section), blocks my installation or update. When I tell people this, they are often surprised to learn about the existance of the apropos(1) command. I suggest adopting an opt-in model.

Unnecessary work if programs are not used between updates Hooks run when packages are installed. If a package s contents are not used between two updates, running the hook in the first update could have been skipped. Running the hook lazily when the package contents are used reduces unnecessary work. As a welcome side-effect, lazy hook evaluation automatically makes the hook work in operating system images, such as live USB thumb drives or SD card images for the Raspberry Pi. Such images must not ship the same crypto keys (e.g. OpenSSH host keys) to all machines, but instead generate a different key on each machine. Why do users keep packages installed they don t use? It s extra work to remember and clean up those packages after use. Plus, users might not realize or value that having fewer packages installed has benefits such as faster updates. I can also imagine that there are people for whom the cost of re-installing packages incentivizes them to just keep packages installed you never know when you might need the program again

Implemented in an interpreted language While working on hermetic packages (more on that in another blog post), where the contained programs are started with modified environment variables (e.g. PATH) via a wrapper bash script, I noticed that the overhead of those wrapper bash scripts quickly becomes significant. For example, when using the excellent magit interface for Git in Emacs, I encountered second-long delays when using hermetic packages compared to standard packages. Re-implementing wrappers in a compiled language provided a significant speed-up. Similarly, getting rid of an extension point which mandates using shell scripts allows us to build an efficient and fast implementation of a predefined set of primitives, where you can reason about their effects and interactions. magit needs to run git a few times for displaying the full status, so small overhead quickly adds up.

Incentivizing more upstream standardization Hooks are an escape hatch for distribution maintainers to express anything which their packaging system cannot express. Distributions should only rely on well-established interfaces such as autoconf s classic ./configure && make && make install (including commonly used flags) to build a distribution package. Integrating upstream software into a distribution should not require custom hooks. For example, instead of requiring a hook which updates a cache of schema files, the library used to interact with those files should transparently (re-)generate the cache or fall back to a slower code path. Distribution maintainers are hard to come by, so we should value their time. In particular, there is a 1:n relationship of packages to distribution package maintainers (software is typically available in multiple Linux distributions), so it makes sense to spend the work in the 1 and have the n benefit.

Can we do without them? If we want to get rid of hooks, we need another mechanism to achieve what we currently achieve with hooks. If the hook is not specific to the package, it can be moved to the package manager. The desired system state should either be derived from the package contents (e.g. required system users can be discovered from systemd service files) or declaratively specified in the package build instructions more on that in another blog post. This turns hooks (arbitrary code) into configuration, which allows the package manager to collapse and sequence the required state changes. E.g., when 5 packages are installed which each need a new system user, the package manager could update /etc/passwd just once. If the hook is specific to the package, it should be moved into the package contents. This typically means moving the functionality into the program start (or the systemd service file if we are talking about a daemon). If (while?) upstream is not convinced, you can either wrap the program or patch it. Note that this case is relatively rare: I have worked with hundreds of packages and the only package-specific functionality I came across was automatically generating host keys before starting OpenSSH s sshd(8) . There is one exception where moving the hook doesn t work: packages which modify state outside of the system, such as bootloaders or kernel images. Even that can be moved out of a package-specific hook, as Fedora demonstrates.

Conclusion Global state modifications performed as part of package installation today use hooks, an overly expressive extension mechanism. Instead, all modifications should be driven by configuration. This is feasible because there are only a few different kinds of desired state modifications. This makes it possible for package managers to optimize package installation.

Michael Stapelberg: Optional dependencies don t work

In the i3 projects, we have always tried hard to avoid optional dependencies. There are a number of reasons behind it, and as I have recently encountered some of the downsides of optional dependencies firsthand, I summarized my thoughts in this article.

What is a (compile-time) optional dependency? When building software from source, most programming languages and build systems support conditional compilation: different parts of the source code are compiled based on certain conditions. An optional dependency is conditional compilation hooked up directly to a knob (e.g. command line flag, configuration file, ), with the effect that the software can now be built without an otherwise required dependency. Let s walk through a few issues with optional dependencies.

Inconsistent experience in different environments Software is usually not built by end users, but by packagers, at least when we are talking about Open Source. Hence, end users don t see the knob for the optional dependency, they are just presented with the fait accompli: their version of the software behaves differently than other versions of the same software. Depending on the kind of software, this situation can be made obvious to the user: for example, if the optional dependency is needed to print documents, the program can produce an appropriate error message when the user tries to print a document. Sometimes, this isn t possible: when i3 introduced an optional dependency on cairo and pangocairo, the behavior itself (rendering window titles) worked in all configurations, but non-ASCII characters might break depending on whether i3 was compiled with cairo. For users, it is frustrating to only discover in conversation that a program has a feature that the user is interested in, but it s not available on their computer. For support, this situation can be hard to detect, and even harder to resolve to the user s satisfaction.

Packaging is more complicated Unfortunately, many build systems don t stop the build when optional dependencies are not present. Instead, you sometimes end up with a broken build, or, even worse: with a successful build that does not work correctly at runtime. This means that packagers need to closely examine the build output to know which dependencies to make available. In the best case, there is a summary of available and enabled options, clearly outlining what this build will contain. In the worst case, you need to infer the features from the checks that are done, or work your way through the --help output. The better alternative is to configure your build system such that it stops when any dependency was not found, and thereby have packagers acknowledge each optional dependency by explicitly disabling the option.

Untested code paths bit rot Code paths which are not used will inevitably bit rot. If you have optional dependencies, you need to test both the code path without the dependency and the code path with the dependency. It doesn t matter whether the tests are automated or manual, the test matrix must cover both paths. Interestingly enough, this principle seems to apply to all kinds of software projects (but it slows down as change slows down): one might think that important Open Source building blocks should have enough users to cover all sorts of configurations. However, consider this example: building cairo without libxrender results in all GTK application windows, menus, etc. being displayed as empty grey surfaces. Cairo does not fail to build without libxrender, but the code path clearly is broken without libxrender.

Can we do without them? I m not saying optional dependencies should never be used. In fact, for bootstrapping, disabling dependencies can save a lot of work and can sometimes allow breaking circular dependencies. For example, in an early bootstrapping stage, binutils can be compiled with --disable-nls to disable internationalization. However, optional dependencies are broken so often that I conclude they are overused. Read on and see for yourself whether you would rather commit to best practices or not introduce an optional dependency.

Best practices If you do decide to make dependencies optional, please:
  1. Set up automated testing for all code path combinations.
  2. Fail the build until packagers explicitly pass a --disable flag.
  3. Tell users their version is missing a dependency at runtime, e.g. in --version.

Michael Stapelberg: distri: 20x faster initramfs (initrd) from scratch

In case you are not yet familiar with why an initramfs (or initrd, or initial ramdisk) is typically used when starting Linux, let me quote the wikipedia definition: [ ] initrd is a scheme for loading a temporary root file system into memory, which may be used as part of the Linux startup process [ ] to make preparations before the real root file system can be mounted. Many Linux distributions do not compile all file system drivers into the kernel, but instead load them on-demand from an initramfs, which saves memory. Another common scenario, in which an initramfs is required, is full-disk encryption: the disk must be unlocked from userspace, but since userspace is encrypted, an initramfs is used.

Motivation Thus far, building a distri disk image was quite slow: This is on an AMD Ryzen 3900X 12-core processor (2019):
distri % time make cryptimage serial=1
80.29s user 13.56s system 186% cpu 50.419 total # 19s image, 31s initrd
Of these 50 seconds, dracut s initramfs generation accounts for 31 seconds (62%)! Initramfs generation time drops to 8.7 seconds once dracut no longer needs to use the single-threaded gzip(1) , but the multi-threaded replacement pigz(1) : This brings the total time to build a distri disk image down to:
distri % time make cryptimage serial=1
76.85s user 13.23s system 327% cpu 27.509 total # 19s image, 8.7s initrd
Clearly, when you use dracut on any modern computer, you should make pigz available. dracut should fail to compile unless one explicitly opts into the known-slower gzip. For more thoughts on optional dependencies, see Optional dependencies don t work . But why does it take 8.7 seconds still? Can we go faster? The answer is Yes! I recently built a distri-specific initramfs I m calling minitrd. I wrote both big parts from scratch:
  1. the initramfs generator program (distri initrd)
  2. a custom Go userland (cmd/minitrd), running as /init in the initramfs.
minitrd generates the initramfs image in 400ms, bringing the total time down to:
distri % time make cryptimage serial=1
50.09s user 8.80s system 314% cpu 18.739 total # 18s image, 400ms initrd
(The remaining time is spent in preparing the file system, then installing and configuring the distri system, i.e. preparing a disk image you can run on real hardware.) How can minitrd be 20 times faster than dracut? dracut is mainly written in shell, with a C helper program. It drives the generation process by spawning lots of external dependencies (e.g. ldd or the dracut-install helper program). I assume that the combination of using an interpreted language (shell) that spawns lots of processes and precludes a concurrent architecture is to blame for the poor performance. minitrd is written in Go, with speed as a goal. It leverages concurrency and uses no external dependencies; everything happens within a single process (but with enough threads to saturate modern hardware). Measuring early boot time using qemu, I measured the dracut-generated initramfs taking 588ms to display the full disk encryption passphrase prompt, whereas minitrd took only 195ms. The rest of this article dives deeper into how minitrd works.

What does an initramfs do? Ultimately, the job of an initramfs is to make the root file system available and continue booting the system from there. Depending on the system setup, this involves the following 5 steps:

1. Load kernel modules to access the block devices with the root file system Depending on the system, the block devices with the root file system might already be present when the initramfs runs, or some kernel modules might need to be loaded first. On my Dell XPS 9360 laptop, the NVMe system disk is already present when the initramfs starts, whereas in qemu, we need to load the virtio_pci module, followed by the virtio_scsi module. How will our userland program know which kernel modules to load? Linux kernel modules declare patterns for their supported hardware as an alias, e.g.:
initrd# grep virtio_pci lib/modules/5.4.6/modules.alias
alias pci:v00001AF4d*sv*sd*bc*sc*i* virtio_pci
Devices in sysfs have a modalias file whose content can be matched against these declarations to identify the module to load:
initrd# cat /sys/devices/pci0000:00/*/modalias
pci:v00001AF4d00001005sv00001AF4sd00000004bc00scFFi00
pci:v00001AF4d00001004sv00001AF4sd00000008bc01sc00i00
[ ]
Hence, for the initial round of module loading, it is sufficient to locate all modalias files within sysfs and load the responsible modules. Loading a kernel module can result in new devices appearing. When that happens, the kernel sends a uevent, which the uevent consumer in userspace receives via a netlink socket. Typically, this consumer is udev(7) , but in our case, it s minitrd. For each uevent messages that comes with a MODALIAS variable, minitrd will load the relevant kernel module(s). When loading a kernel module, its dependencies need to be loaded first. Dependency information is stored in the modules.dep file in a Makefile-like syntax:
initrd# grep virtio_pci lib/modules/5.4.6/modules.dep
kernel/drivers/virtio/virtio_pci.ko: kernel/drivers/virtio/virtio_ring.ko kernel/drivers/virtio/virtio.ko
To load a module, we can open its file and then call the Linux-specific finit_module(2) system call. Some modules are expected to return an error code, e.g. ENODEV or ENOENT when some hardware device is not actually present. Side note: next to the textual versions, there are also binary versions of the modules.alias and modules.dep files. Presumably, those can be queried more quickly, but for simplicitly, I have not (yet?) implemented support in minitrd.

2. Console settings: font, keyboard layout Setting a legible font is necessary for hi-dpi displays. On my Dell XPS 9360 (3200 x 1800 QHD+ display), the following works well:
initrd# setfont latarcyrheb-sun32
Setting the user s keyboard layout is necessary for entering the LUKS full-disk encryption passphrase in their preferred keyboard layout. I use the NEO layout:
initrd# loadkeys neo

3. Block device identification In the Linux kernel, block device enumeration order is not necessarily the same on each boot. Even if it was deterministic, device order could still be changed when users modify their computer s device topology (e.g. connect a new disk to a formerly unused port). Hence, it is good style to refer to disks and their partitions with stable identifiers. This also applies to boot loader configuration, and so most distributions will set a kernel parameter such as root=UUID=1fa04de7-30a9-4183-93e9-1b0061567121. Identifying the block device or partition with the specified UUID is the initramfs s job. Depending on what the device contains, the UUID comes from a different place. For example, ext4 file systems have a UUID field in their file system superblock, whereas LUKS volumes have a UUID in their LUKS header. Canonically, probing a device to extract the UUID is done by libblkid from the util-linux package, but the logic can easily be re-implemented in other languages and changes rarely. minitrd comes with its own implementation to avoid cgo or running the blkid(8) program.

4. LUKS full-disk encryption unlocking (only on encrypted systems) Unlocking a LUKS-encrypted volume is done in userspace. The kernel handles the crypto, but reading the metadata, obtaining the passphrase (or e.g. key material from a file) and setting up the device mapper table entries are done in user space.
initrd# modprobe algif_skcipher
initrd# cryptsetup luksOpen /dev/sda4 cryptroot1
After the user entered their passphrase, the root file system can be mounted:
initrd# mount /dev/dm-0 /mnt

5. Continuing the boot process (switch_root) Now that everything is set up, we need to pass execution to the init program on the root file system with a careful sequence of chdir(2) , mount(2) , chroot(2) , chdir(2) and execve(2) system calls that is explained in this busybox switch_root comment.
initrd# mount -t devtmpfs dev /mnt/dev
initrd# exec switch_root -c /dev/console /mnt /init
To conserve RAM, the files in the temporary file system to which the initramfs archive is extracted are typically deleted.

How is an initramfs generated? An initramfs image (more accurately: archive) is a compressed cpio archive. Typically, gzip compression is used, but the kernel supports a bunch of different algorithms and distributions such as Ubuntu are switching to lz4. Generators typically prepare a temporary directory and feed it to the cpio(1) program. In minitrd, we read the files into memory and generate the cpio archive using the go-cpio package. We use the pgzip package for parallel gzip compression. The following files need to go into the cpio archive:

minitrd Go userland The minitrd binary is copied into the cpio archive as /init and will be run by the kernel after extracting the archive. Like the rest of distri, minitrd is built statically without cgo, which means it can be copied as-is into the cpio archive.

Linux kernel modules Aside from the modules.alias and modules.dep metadata files, the kernel modules themselves reside in e.g. /lib/modules/5.4.6/kernel and need to be copied into the cpio archive. Copying all modules results in a 80 MiB archive, so it is common to only copy modules that are relevant to the initramfs s features. This reduces archive size to 24 MiB. The filtering relies on hard-coded patterns and module names. For example, disk encryption related modules are all kernel modules underneath kernel/crypto, plus kernel/drivers/md/dm-crypt.ko. When generating a host-only initramfs (works on precisely the computer that generated it), some initramfs generators look at the currently loaded modules and just copy those.

Console Fonts and Keymaps The kbd package s setfont(8) and loadkeys(1) programs load console fonts and keymaps from /usr/share/consolefonts and /usr/share/keymaps, respectively. Hence, these directories need to be copied into the cpio archive. Depending on whether the initramfs should be generic (work on many computers) or host-only (works on precisely the computer/settings that generated it), the entire directories are copied, or only the required font/keymap.

cryptsetup, setfont, loadkeys These programs are (currently) required because minitrd does not implement their functionality. As they are dynamically linked, not only the programs themselves need to be copied, but also the ELF dynamic linking loader (path stored in the .interp ELF section) and any ELF library dependencies. For example, cryptsetup in distri declares the ELF interpreter /ro/glibc-amd64-2.27-3/out/lib/ld-linux-x86-64.so.2 and declares dependencies on shared libraries libcryptsetup.so.12, libblkid.so.1 and others. Luckily, in distri, packages contain a lib subdirectory containing symbolic links to the resolved shared library paths (hermetic packaging), so it is sufficient to mirror the lib directory into the cpio archive, recursing into shared library dependencies of shared libraries. cryptsetup also requires the GCC runtime library libgcc_s.so.1 to be present at runtime, and will abort with an error message about not being able to call pthread_cancel(3) if it is unavailable.

time zone data To print log messages in the correct time zone, we copy /etc/localtime from the host into the cpio archive.

minitrd outside of distri? I currently have no desire to make minitrd available outside of distri. While the technical challenges (such as extending the generator to not rely on distri s hermetic packages) are surmountable, I don t want to support people s initramfs remotely. Also, I think that people s efforts should in general be spent on rallying behind dracut and making it work faster, thereby benefiting all Linux distributions that use dracut (increasingly more). With minitrd, I have demonstrated that significant speed-ups are achievable.

Conclusion It was interesting to dive into how an initramfs really works. I had been working with the concept for many years, from small tasks such as debug why the encrypted root file system is not unlocked to more complicated tasks such as set up a root file system on DRBD for a high-availability setup . But even with that sort of experience, I didn t know all the details, until I was forced to implement every little thing. As I suspected going into this exercise, dracut is much slower than it needs to be. Re-implementing its generation stage in a modern language instead of shell helps a lot. Of course, my minitrd does a bit less than dracut, but not drastically so. The overall architecture is the same. I hope my effort helps with two things:
  1. As a teaching implementation: instead of wading through the various components that make up a modern initramfs (udev, systemd, various shell scripts, ), people can learn about how an initramfs works in a single place.
  2. I hope the significant time difference motivates people to improve dracut.

Appendix: qemu development environment Before writing any Go code, I did some manual prototyping. Learning how other people prototype is often immensely useful to me, so I m sharing my notes here. First, I copied all kernel modules and a statically built busybox binary:
% mkdir -p lib/modules/5.4.6
% cp -Lr /ro/lib/modules/5.4.6/* lib/modules/5.4.6/
% cp ~/busybox-1.22.0-amd64/busybox sh
To generate an initramfs from the current directory, I used:
% find .   cpio -o -H newc   pigz > /tmp/initrd
In distri s Makefile, I append these flags to the QEMU invocation:
-kernel /tmp/kernel \
-initrd /tmp/initrd \
-append "root=/dev/mapper/cryptroot1 rdinit=/sh ro console=ttyS0,115200 rd.luks=1 rd.luks.uuid=63051f8a-54b9-4996-b94f-3cf105af2900 rd.luks.name=63051f8a-54b9-4996-b94f-3cf105af2900=cryptroot1 rd.vconsole.keymap=neo rd.vconsole.font=latarcyrheb-sun32 init=/init systemd.setenv=PATH=/bin rw vga=836"
The vga= mode parameter is required for loading font latarcyrheb-sun32. Once in the busybox shell, I manually prepared the required mount points and kernel modules:
ln -s sh mount
ln -s sh lsmod
mkdir /proc /sys /run /mnt
mount -t proc proc /proc
mount -t sysfs sys /sys
mount -t devtmpfs dev /dev
modprobe virtio_pci
modprobe virtio_scsi
As a next step, I copied cryptsetup and dependencies into the initramfs directory:
% for f in /ro/cryptsetup-amd64-2.0.4-6/lib/*; do full=$(readlink -f $f); rel=$(echo $full   sed 's,^/,,g'); mkdir -p $(dirname $rel); install $full $rel; done
% ln -s ld-2.27.so ro/glibc-amd64-2.27-3/out/lib/ld-linux-x86-64.so.2
% cp /ro/glibc-amd64-2.27-3/out/lib/ld-2.27.so ro/glibc-amd64-2.27-3/out/lib/ld-2.27.so
% cp -r /ro/cryptsetup-amd64-2.0.4-6/lib ro/cryptsetup-amd64-2.0.4-6/
% mkdir -p ro/gcc-libs-amd64-8.2.0-3/out/lib64/
% cp /ro/gcc-libs-amd64-8.2.0-3/out/lib64/libgcc_s.so.1 ro/gcc-libs-amd64-8.2.0-3/out/lib64/libgcc_s.so.1
% ln -s /ro/gcc-libs-amd64-8.2.0-3/out/lib64/libgcc_s.so.1 ro/cryptsetup-amd64-2.0.4-6/lib
% cp -r /ro/lvm2-amd64-2.03.00-6/lib ro/lvm2-amd64-2.03.00-6/
In busybox, I used the following commands to unlock the root file system:
modprobe algif_skcipher
./cryptsetup luksOpen /dev/sda4 cryptroot1
mount /dev/dm-0 /mnt

Michael Stapelberg: Hermetic packages (in distri)

In distri, packages (e.g. emacs) are hermetic. By hermetic, I mean that the dependencies a package uses (e.g. libusb) don t change, even when newer versions are installed. For example, if package libusb-amd64-1.0.22-7 is available at build time, the package will always use that same version, even after the newer libusb-amd64-1.0.23-8 will be installed into the package store. Another way of saying the same thing is: packages in distri are always co-installable. This makes the package store more robust: additions to it will not break the system. On a technical level, the package store is implemented as a directory containing distri SquashFS images and metadata files, into which packages are installed in an atomic way.

Out of scope: plugins are not hermetic by design One exception where hermeticity is not desired are plugin mechanisms: optionally loading out-of-tree code at runtime obviously is not hermetic. As an example, consider glibc s Name Service Switch (NSS) mechanism. Page 29.4.1 Adding another Service to NSS describes how glibc searches $prefix/lib for shared libraries at runtime. Debian ships about a dozen NSS libraries for a variety of purposes, and enterprise setups might add their own into the mix. systemd (as of v245) accounts for 4 NSS libraries, e.g. nss-systemd for user/group name resolution for users allocated through systemd s DynamicUser= option. Having packages be as hermetic as possible remains a worthwhile goal despite any exceptions: I will gladly use a 99% hermetic system over a 0% hermetic system any day. Side note: Xorg s driver model (which can be characterized as a plugin mechanism) does not fall under this category because of its tight API/ABI coupling! For this case, where drivers are only guaranteed to work with precisely the Xorg version for which they were compiled, distri uses per-package exchange directories.

Implementation of hermetic packages in distri On a technical level, the requirement is: all paths used by the program must always result in the same contents. This is implemented in distri via the read-only package store mounted at /ro, e.g. files underneath /ro/emacs-amd64-26.3-15 never change. To change all paths used by a program, in practice, three strategies cover most paths:

ELF interpreter and dynamic libraries Programs on Linux use the ELF file format, which contains two kinds of references: First, the ELF interpreter (PT_INTERP segment), which is used to start the program. For dynamically linked programs on 64-bit systems, this is typically ld.so(8). Many distributions use system-global paths such as /lib64/ld-linux-x86-64.so.2, but distri compiles programs with -Wl,--dynamic-linker=/ro/glibc-amd64-2.31-4/out/lib/ld-linux-x86-64.so.2 so that the full path ends up in the binary. The ELF interpreter is shown by file(1), but you can also use readelf -a $BINARY grep 'program interpreter' to display it. And secondly, the rpath, a run-time search path for dynamic libraries. Instead of storing full references to all dynamic libraries, we set the rpath so that ld.so(8) will find the correct dynamic libraries. Originally, we used to just set a long rpath, containing one entry for each dynamic library dependency. However, we have since switched to using a single lib subdirectory per package as its rpath, and placing symlinks with full path references into that lib directory, e.g. using -Wl,-rpath=/ro/grep-amd64-3.4-4/lib. This is better for performance, as ld.so uses a per-directory cache. Note that program load times are significantly influenced by how quickly you can locate the dynamic libraries. distri uses a FUSE file system to load programs from, so getting proper -ENOENT caching into place drastically sped up program load times. Instead of compiling software with the -Wl,--dynamic-linker and -Wl,-rpath flags, one can also modify these fields after the fact using patchelf(1). For closed-source programs, this is the only possibility. The rpath can be inspected by using e.g. readelf -a $BINARY grep RPATH.

Environment variable setup wrapper programs Many programs are influenced by environment variables: to start another program, said program is often found by checking each directory in the PATH environment variable. Such search paths are prevalent in scripting languages, too, to find modules. Python has PYTHONPATH, Perl has PERL5LIB, and so on. To set up these search path environment variables at run time, distri employs an indirection. Instead of e.g. teensy-loader-cli, you run a small wrapper program that calls precisely one execve system call with the desired environment variables. Initially, I used shell scripts as wrapper programs because they are easily inspectable. This turned out to be too slow, so I switched to compiled programs. I m linking them statically for fast startup, and I m linking them against musl libc for significantly smaller file sizes than glibc (per-executable overhead adds up quickly in a distribution!). Note that the wrapper programs prepend to the PATH environment variable, they don t replace it in its entirely. This is important so that users have a way to extend the PATH (and other variables) if they so choose. This doesn t hurt hermeticity because it is only relevant for programs that were not present at build time, i.e. plugin mechanisms which, by design, cannot be hermetic.

Shebang interpreter patching The Shebang of scripts contains a path, too, and hence needs to be changed. We don t do this in distri yet (the number of packaged scripts is small), but we should.

Performance requirements The performance improvements in the previous sections are not just good to have, but practically required when many processes are involved: without them, you ll encounter second-long delays in magit which spawns many git processes under the covers, or in dracut, which spawns one cp(1) process per file.

Downside: rebuild of packages required to pick up changes Linux distributions such as Debian consider it an advantage to roll out security fixes to the entire system by updating a single shared library package (e.g. openssl). The flip side of that coin is that changes to a single critical package can break the entire system. With hermetic packages, all reverse dependencies must be rebuilt when a library s changes should be picked up by the whole system. E.g., when openssl changes, curl must be rebuilt to pick up the new version of openssl. This approach trades off using more bandwidth and more disk space (temporarily) against reducing the blast radius of any individual package update.

Downside: long env variables are cumbersome to deal with This can be partially mitigated by removing empty directories at build time, which will result in shorter variables. In general, there is no getting around this. One little trick is to use tr : '\n', e.g.:
distri0# echo $PATH
/usr/bin:/bin:/usr/sbin:/sbin:/ro/openssh-amd64-8.2p1-11/out/bin
distri0# echo $PATH   tr : '\n'
/usr/bin
/bin
/usr/sbin
/sbin
/ro/openssh-amd64-8.2p1-11/out/bin

Edge cases The implementation outlined above works well in hundreds of packages, and only a small handful exhibited problems of any kind. Here are some issues I encountered:

Issue: accidental ABI breakage in plugin mechanisms NSS libraries built against glibc 2.28 and newer cannot be loaded by glibc 2.27. In all likelihood, such changes do not happen too often, but it does illustrate that glibc s published interface spec is not sufficient for forwards and backwards compatibility. In distri, we could likely use a per-package exchange directory for glibc s NSS mechanism to prevent the above problem from happening in the future.

Issue: wrapper bypass when a program re-executes itself Some programs try to arrange for themselves to be re-executed outside of their current process tree. For example, consider building a program with the meson build system:
  1. When meson first configures the build, it generates ninja files (think Makefiles) which contain command lines that run the meson --internal helper.
  2. Once meson returns, ninja is called as a separate process, so it will not have the environment which the meson wrapper sets up. ninja then runs the previously persisted meson command line. Since the command line uses the full path to meson (not to its wrapper), it bypasses the wrapper.
Luckily, not many programs try to arrange for other process trees to run them. Here is a table summarizing how affected programs might try to arrange for re-execution, whether the technique results in a wrapper bypass, and what we do about it in distri:
technique to execute itself uses wrapper mitigation
run-time: find own basename in PATH yes wrapper program
compile-time: embed expected path no; bypass! configure or patch
run-time: argv[0] or /proc/self/exe no; bypass! patch
One might think that setting argv[0] to the wrapper location seems like a way to side-step this problem. We tried doing this in distri, but had to revert and go the other way.

Misc smaller issues

Appendix: Could other distributions adopt hermetic packages? At a very high level, adopting hermetic packages will require two steps:
  1. Using fully qualified paths whose contents don t change (e.g. /ro/emacs-amd64-26.3-15) generally requires rebuilding programs, e.g. with --prefix set.
  2. Once you use fully qualified paths you need to make the packages able to exchange data. distri solves this with exchange directories, implemented in the /ro file system which is backed by a FUSE daemon.
The first step is pretty simple, whereas the second step is where I expect controversy around any suggested mechanism.

Appendix: demo (in distri) This appendix contains commands and their outputs, run on upcoming distri version supersilverhaze, but verified to work on older versions, too. Large outputs have been collapsed and can be expanded by clicking on the output. The /bin directory contains symlinks for the union of all package s bin subdirectories:
distri0# readlink -f /bin/teensy_loader_cli
/ro/teensy-loader-cli-amd64-2.1+g20180927-7/bin/teensy_loader_cli
The wrapper program in the bin subdirectory is small:
distri0# ls -lh $(readlink -f /bin/teensy_loader_cli)
-rwxr-xr-x 1 root root 46K Apr 21 21:56 /ro/teensy-loader-cli-amd64-2.1+g20180927-7/bin/teensy_loader_cli
Wrapper programs execute quickly:
distri0# strace -fvy /bin/teensy_loader_cli & head cat -n
     1  execve("/bin/teensy_loader_cli", ["/bin/teensy_loader_cli"], ["USER=root", "LOGNAME=root", "HOME=/root", "PATH=/ro/bash-amd64-5.0-4/bin:/r"..., "SHELL=/bin/zsh", "TERM=screen.xterm-256color", "XDG_SESSION_ID=c1", "XDG_RUNTIME_DIR=/run/user/0", "DBUS_SESSION_BUS_ADDRESS=unix:pa"..., "XDG_SESSION_TYPE=tty", "XDG_SESSION_CLASS=user", "SSH_CLIENT=10.0.2.2 42556 22", "SSH_CONNECTION=10.0.2.2 42556 10"..., "SSHTTY=/dev/pts/0", "SHLVL=1", "PWD=/root", "OLDPWD=/root", "=/usr/bin/strace", "LD_LIBRARY_PATH=/ro/bash-amd64-5"..., "PERL5LIB=/ro/bash-amd64-5.0-4/ou"..., "PYTHONPATH=/ro/bash-amd64-5.b0-4/"...]) = 0
     2  arch_prctl(ARCH_SET_FS, 0x40c878)       = 0
     3  set_tid_address(0x40ca9c)               = 715
     4  brk(NULL)                               = 0x15b9000
     5  brk(0x15ba000)                          = 0x15ba000
     6  brk(0x15bb000)                          = 0x15bb000
     7  brk(0x15bd000)                          = 0x15bd000
     8  brk(0x15bf000)                          = 0x15bf000
     9  brk(0x15c1000)                          = 0x15c1000
    10  execve("/ro/teensy-loader-cli-amd64-2.1+g20180927-7/out/bin/teensy_loader_cli", ["/ro/teensy-loader-cli-amd64-2.1+"...], ["USER=root", "LOGNAME=root", "HOME=/root", "PATH=/ro/bash-amd64-5.0-4/bin:/r"..., "SHELL=/bin/zsh", "TERM=screen.xterm-256color", "XDG_SESSION_ID=c1", "XDG_RUNTIME_DIR=/run/user/0", "DBUS_SESSION_BUS_ADDRESS=unix:pa"..., "XDG_SESSION_TYPE=tty", "XDG_SESSION_CLASS=user", "SSH_CLIENT=10.0.2.2 42556 22", "SSH_CONNECTION=10.0.2.2 42556 10"..., "SSHTTY=/dev/pts/0", "SHLVL=1", "PWD=/root", "OLDPWD=/root", "=/usr/bin/strace", "LD_LIBRARY_PATH=/ro/bash-amd64-5"..., "PERL5LIB=/ro/bash-amd64-5.0-4/ou"..., "PYTHONPATH=/ro/bash-amd64-5.0-4/"...]) = 0
Confirm which ELF interpreter is set for a binary using readelf(1):
distri0# readelf -a /ro/teensy-loader-cli-amd64-2.1+g20180927-7/out/bin/teensy_loader_cli grep 'program interpreter'
[Requesting program interpreter: /ro/glibc-amd64-2.31-4/out/lib/ld-linux-x86-64.so.2]
Confirm the rpath is set to the package s lib subdirectory using readelf(1):
distri0# readelf -a /ro/teensy-loader-cli-amd64-2.1+g20180927-7/out/bin/teensy_loader_cli grep RPATH
 0x000000000000000f (RPATH)              Library rpath: [/ro/teensy-loader-cli-amd64-2.1+g20180927-7/lib]
and verify the lib subdirectory has the expected symlinks and target versions:
distri0# find /ro/teensy-loader-cli-amd64-*/lib -type f -printf '%P -> %l\n'
libc.so.6 -> /ro/glibc-amd64-2.31-4/out/lib/libc-2.31.so
libpthread.so.0 -> /ro/glibc-amd64-2.31-4/out/lib/libpthread-2.31.so
librt.so.1 -> /ro/glibc-amd64-2.31-4/out/lib/librt-2.31.so
libudev.so.1 -> /ro/libudev-amd64-245-11/out/lib/libudev.so.1.6.17
libusb-0.1.so.4 -> /ro/libusb-compat-amd64-0.1.5-7/out/lib/libusb-0.1.so.4.4.4
libusb-1.0.so.0 -> /ro/libusb-amd64-1.0.23-8/out/lib/libusb-1.0.so.0.2.0
To verify the correct libraries are actually loaded, you can set the LD_DEBUG environment variable for ld.so(8):
distri0# LD_DEBUG=libs teensy_loader_cli
[ ]
       678:     find library=libc.so.6 [0]; searching
       678:      search path=/ro/teensy-loader-cli-amd64-2.1+g20180927-7/lib            (RPATH from file /ro/teensy-loader-cli-amd64-2.1+g20180927-7/out/bin/teensy_loader_cli)
       678:       trying file=/ro/teensy-loader-cli-amd64-2.1+g20180927-7/lib/libc.so.6
       678:
[ ]
NSS libraries that distri ships:
find /lib/ -name "libnss_*.so.2" -type f -printf '%P -> %l\n'
libnss_myhostname.so.2 -> ../systemd-amd64-245-11/out/lib/libnss_myhostname.so.2
libnss_mymachines.so.2 -> ../systemd-amd64-245-11/out/lib/libnss_mymachines.so.2
libnss_resolve.so.2 -> ../systemd-amd64-245-11/out/lib/libnss_resolve.so.2
libnss_systemd.so.2 -> ../systemd-amd64-245-11/out/lib/libnss_systemd.so.2
libnss_compat.so.2 -> ../glibc-amd64-2.31-4/out/lib/libnss_compat.so.2
libnss_db.so.2 -> ../glibc-amd64-2.31-4/out/lib/libnss_db.so.2
libnss_dns.so.2 -> ../glibc-amd64-2.31-4/out/lib/libnss_dns.so.2
libnss_files.so.2 -> ../glibc-amd64-2.31-4/out/lib/libnss_files.so.2
libnss_hesiod.so.2 -> ../glibc-amd64-2.31-4/out/lib/libnss_hesiod.so.2

11 August 2020

Dirk Eddelbuettel: RcppSimdJson 0.1.1: More Features

A first update following for the exciting RcppSimdJson 0.1.0 release last month is now on CRAN. Version 0.1.1 brings further enhancements such direct parsing of raw chars, working with compressed files as well as much expanded querying ability all thanks to Brendan, some improvements to our demos thanks to Daniel as well as a small fix via a one-liner borrowed from upstream for a reported UBSAN issue. RcppSimdJson wraps the fantastic and genuinely impressive simdjson library by Daniel Lemire and collaborators. Via very clever algorithmic engineering to obtain largely branch-free code, coupled with modern C++ and newer compiler instructions, it results in parsing gigabytes of JSON parsed per second which is quite mindboggling. The best-case performance is faster than CPU speed as use of parallel SIMD instructions and careful branch avoidance can lead to less than one cpu cycle use per byte parsed; see the video of the talk by Daniel Lemire at QCon (also voted best talk). The detailed list of changes follows.

Changes in version 0.1.1 (2020-08-10)
  • Corrected incorrect file deletion when mixing local and remote files (Brendan in #34) closing #33.
  • Added support for raw vectors, compressed files, and compressed downloads (Dirk and Brendan in #36, #39, and #45 closing #35 and addressing issues raised in #40 and #44).
  • Examples in two demos are now more self-sufficient (Daniel Lemire and Dirk in #42).
  • Expanded query functionality to include single, flat, and nested queries (Brendan in #45 closing #43).
  • Split error handling parameters from error_ok/on_error into parse_error_ok/on_parse_error and query_error_ok/on_query_error (Brendan in #45).
  • One-line upstream change to address sanitizer error on cast.

Courtesy of CRANberries, there is also a diffstat report for this release. For questions, suggestions, or issues please use the issue tracker at the GitHub repo. If you like this or other open-source work I do, you can now sponsor me at GitHub. For the first year, GitHub will match your contributions.

This post by Dirk Eddelbuettel originated on his Thinking inside the box blog. Please report excessive re-aggregation in third-party for-profit settings.

10 August 2020

Russ Allbery: rra-c-util 8.3

In this release of my utility library for my other packages, I finally decided to drop support for platforms without a working snprintf. This dates back to the early 2000s and a very early iteration of this package. At the time, there were still some older versions of UNIX without snprintf at all. More commonly, it was buggy. The most common problem was that it would return -1 if the buffer wasn't large enough rather than returning the necessary size of the buffer. Or, in some cases, it wouldn't support a buffer size of 0 and a NULL buffer to get the necessary size. At the time I added this support for INN and some other packages, Solaris had several of these issues. But C99 standardized the correct snprintf behavior, and slowly every maintained operating system was fixed. (I forget whether it was fixed in Solaris 8 or Solaris 9, but regardless, Solaris has had a working snprintf for many years.) Meanwhile, the replacement function (Patrick Powell's version, also used by mutt and other packages) was a huge wad of code and a corresponding test suite. Over time, I've increased the aggressiveness of linters to try to catch more dangerous C pitfalls, and that's required carrying more and more small modifications plus a preamble to disable various warnings that I didn't want to try to fix. The straw that broke the camel's back was Clang's new case fallthrough warning. Clang stopped supporting the traditional /* fallthrough */ comment. It now prefers [[clang:fallthrough]] syntax, but of course older compilers choke on that. It does support the GCC __attribute__((__fallthrough__)) syntax, but older compilers don't like that construction because they think it's an empty statement. It was a mess, and I decided the time had come to drop this support effort. At this point, if you're still running an operating system without C99 snprintf, I think it's essentially a retrocomputing or at least extremely stable legacy production situation, and you're unlikely to want the latest and greatest releases of new software. Hopefully that assumption is correct, or at least correct enough. (I realize the right solution to this problem is probably for me to use Gnulib for portability. But converting to it is a whole other project with a lot of other implications and machinery, and I'm not sure that's what I want to spend time on.) Also in this release is a fix for network tests on hosts with no IPv4 addresses (more on this when I release the next version of remctl), fixes for style issues found by Perl::Critic::Freenode, and some other test suite improvements. You can get the latest version from the rra-c-util distribution page.

Arnaud Rebillout: GoAccess 1.4, a detailed tutorial

GoAccess v1.4 was just released a few weeks ago! Let's take this chance to write a loooong tutorial. We'll go over every steps to install and operate GoAccess. This is a tutorial aimed at those who don't play sysadmin every day, and that's why it's so long, I did my best to provide thorough explanations all along, so that it's more than just a "copy-and-paste" kind of tutorial. And for those who do play sysadmin everyday: please try not to fall asleep while reading, and don't hesitate to drop me an e-mail if you spot anything inaccurate in here. Thanks! Introduction So what's GoAccess already? GoAccess is a web log analyzer, and it allows you to visualize the traffic for your website, and get to know a bit more about your visitors: how many visitors and hits, for which pages, coming from where (geolocation, operating system, web browser...), etc... It does so by parsing the access logs from your web server, be it Apache, NGINX or whatever. GoAccess gives you different options to display the statistics, and in this tutorial we'll focus on producing a HTML report. Meaning that you can see the statistics for your website straight in your web browser, under the form of a single HTML page. For an example, you can have a look at the stats of my blog here: http://goaccess.arnaudr.io. GoAccess is written in C, it has very few dependencies, it had been around for about 10 years, and it's distributed under the MIT license. Assumptions This tutorial is about installing and configuring, so I'll assume that all the commands are run as root. I won't prefix each of them with sudo. I use the Apache web server, running on a Debian system. I don't think it matters so much for this tutorial though. If you're using NGINX it's fine, you can keep reading. Also, I will just use the name SITE for the name of the website that we want to analyze with GoAccess. Just replace that with the real name of your site. I also assume the following locations for your stuff: If you have your stuff in /srv/SITE/ log,www instead, no worries, just adjust the paths accordingly, I bet you can do it. Installation The latest version of GoAccess is v1.4, and it's not yet available in the Debian repositories. So for this part, you can follow the instructions from the official GoAccess download page. Install steps are explained in details, so there's nothing left for me to say :) When this is done, let's get started with the basics. We're talking about the latest version v1.4 here, let's make sure:
$ goaccess --version
GoAccess - 1.4.
...
Now let's try to create a HTML report. I assume that you already have a website up and running. GoAccess needs to parse the access logs. These logs are optional, they might or might not be created by your web server, depending on how it's configured. Usually, these log files are named access.log, unsurprisingly. You can check if those logs exist on your system by running this command:
find /var/log -name access.log
Another important thing to know is that these logs can be in different formats. In this tutorial we'll assume that we work with the combined log format, because it seems to be the most common default. To check what kind of access logs your web server produces, you must look at the configuration for your site. For an Apache web server, you should have such a line in the file /etc/apache2/sites-enabled/SITE.conf:
CustomLog $ APACHE_LOG_DIR /SITE/access.log combined
For NGINX, it's quite similar. The configuration file would be something like /etc/nginx/sites-enabled/SITE, and the line to enable access logs would be something like:
access_log /var/log/nginx/SITE/access.log
Note that NGINX writes the access logs in the combined format by default, that's why you don't see the word combined anywhere in the line above: it's implicit. Alright, so from now on we assume that yes, you have access log files available, and yes, they are in the combined log format. If that's the case, then you can already run GoAccess and generate a report, for example for the log file /var/log/apache2/access.log
goaccess \
    --log-format COMBINED \
    --output /tmp/report.html \
    /var/log/apache2/access.log
It's possible to give GoAccess more than one log files to process, so if you have for example the file access.log.1 around, you can use it as well:
goaccess \
    --log-format COMBINED \
    --output /tmp/report.html \
    /var/log/apache2/access.log \
    /var/log/apache2/access.log.1
If GoAccess succeeds (and it should), you're on the right track! All is left to do to complete this test is to have a look at the HTML report created. It's a single HTML page, so you can easily scp it to your machine, or just move it to the document root of your site, and then open it in your web browser. Looks good? So let's move on to more interesting things. Web server configuration This part is very short, because in terms of configuration of the web server, there's very little to do. As I said above, the only thing you want from the web server is to create access log files. Then you want to be sure that GoAccess and your web server agree on the format for these files. In the part above we used the combined log format, but GoAccess supports many other common log formats out of the box, and even allows you to parse custom log formats. For more details, refer to the option --log-format in the GoAccess manual page. Another common log format is named, well, common. It even has its own Wikipedia page. But compared to combined, the common log format contains less information, it doesn't include the referrer and user-agent values, meaning that you won't have it in the GoAccess report. So at this point you should understand that, unsurprisingly, GoAccess can only tell you about what's in the access logs, no more no less. And that's all in term of web server configuration. Configuration to run GoAccess unprivileged Now we're going to create a user and group for GoAccess, so that we don't have to run it as root. The reason is that, well, for everything running unattended on your server, the less code runs as root, the better. It's good practice and common sense. In this case, GoAccess is simply a log analyzer. So it just needs to read the logs files from your web server, and there is no need to be root for that, an unprivileged user can do the job just as well, assuming it has read permissions on /var/log/apache2 or /var/log/nginx. The log files of the web server are usually part of the adm group (though it might depend on your distro, I'm not sure). This is something you can check easily with the following command:
ls -l /var/log   grep -e apache2 -e nginx
As a result you should get something like that:
drwxr-x--- 2 root adm 20480 Jul 22 00:00 /var/log/apache2/
And as you can see, the directory apache2 belongs to the group adm. It means that you don't need to be root to read the logs, instead any unprivileged user that belongs to the group adm can do it. So, let's create the goaccess user, and add it to the adm group:
adduser --system --group --no-create-home goaccess
addgroup goaccess adm
And now, let's run GoAccess unprivileged, and verify that it can still read the log files:
setpriv \
    --reuid=goaccess --regid=goaccess \
    --init-groups --inh-caps=-all \
    -- \
    goaccess \
    --log-format COMBINED \
    --output /tmp/report2.html \
    /var/log/apache2/access.log
setpriv is the command used to drop privileges. The syntax is quite verbose, it's not super friendly for tutorials, but don't be scared and read the manual page to learn what it does. In any case, this command should work, and at this point, it means that you have a goaccess user ready, and we'll use it to run GoAccess unprivileged. Integration, option A - Run GoAccess once a day, from a logrotate hook In this part we wire things together, so that GoAccess processes the log files once a day, adds the new logs to its internal database, and generates a report from all that aggregated data. The result will be a single HTML page. Introducing logrotate In order to do that, we'll use a logrotate hook. logrotate is a little tool that should already be installed on your server, and that runs once a day, and that is in charge of rotating the log files. "Rotating the logs" means moving access.log to access.log.1 and so on. With logrotate, a new log file is created every day, and log files that are too old are deleted. That's what prevents your logs from filling up your disk basically :) You can check that logrotate is indeed installed and enabled with this command (assuming that your init system is systemd):
systemctl status logrotate.timer
What's interesting for us is that logrotate allows you to run scripts before and after the rotation is performed, so it's an ideal place from where to run GoAccess. In short, we want to run GoAccess just before the logs are rotated away, in the prerotate hook. But let's do things in order. At first, we need to write a little wrapper script that will be in charge of running GoAccess with the right arguments, and that will process all of your sites. The wrapper script This wrapper is made to process more than one site, but if you have only one site it works just as well, of course. So let me just drop it on you like that, and I'll explain afterward. Here's my wrapper script:
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#!/bin/bash
# Process log files /var/www/apache2/SITE/access.log,
# only if /var/lib/goaccess-db/SITE exists.
# Create HTML reports in $1, a directory that must exist.
set -eu
OUTDIR=
LOGDIR=/var/log/apache2
DBDIR=/var/lib/goaccess-db
fail()   echo >&2 "$@"; exit 1;  
[ $# -eq 1 ]   fail "Usage: $(basename $0) OUTPUT_DIRECTORY"
OUTDIR=$1
[ -d "$OUTDIR" ]   fail "'$OUTDIR' is not a directory"
[ -d "$LOGDIR" ]   fail "'$LOGDIR' is not a directory"
[ -d "$DBDIR"  ]   fail "'$DBDIR' is not a directory"
for d in $(find "$LOGDIR" -mindepth 1 -maxdepth 1 -type d); do
    site=$(basename "$sitedir")
    dbdir=$DBDIR/$site
    logfile=$d/access.log
    outfile=$OUTDIR/$site.html
    if [ ! -d "$dbdir" ]   [ ! -e "$logfile" ]; then
        echo "  Skipping site '$site'"
        continue
    else
        echo "  Processing site '$site'"
    fi
    setpriv \
        --reuid=goaccess --regid=goaccess \
        --init-groups --inh-caps=-all \
        -- \
    goaccess \
        --agent-list \
        --anonymize-ip \
        --persist \
        --restore \
        --config-file /etc/goaccess/goaccess.conf \
        --db-path "$dbdir" \
        --log-format "COMBINED" \
        --output "$outfile" \
        "$logfile"
done
So you'd install this script at /usr/local/bin/goaccess-wrapper for example, and make it executable:
chmod +x /usr/local/bin/goaccess-wrapper
A few things to note: As is, the script makes the assumption that the logs for your site are logged in a sub-directory /var/log/apache2/SITE/. If it's not the case, adjust that in the wrapper accordingly. The name of this sub-directory is then used to find the GoAccess database directory /var/lib/goaccess-db/SITE/. This directory is expected to exist, meaning that if you don't create it yourself, the wrapper won't process this particular site. It's a simple way to control which sites are processed by this GoAccess wrapper, and which sites are not. So if you want goaccess-wrapper to process the site SITE, just create a directory with the name of this site under /var/lib/goaccess-db:
mkdir -p /var/lib/goaccess-db/SITE
chown goaccess:goaccess /var/lib/goaccess-db/SITE
Now let's create an output directory:
mkdir /tmp/goaccess-reports
chown goaccess:goaccess /tmp/goaccess-reports
And let's give a try to the wrapper script:
goaccess-wrapper /tmp/goaccess-reports
ls /tmp/goaccess-reports
Which should give you:
SITE.html
At the same time, you can check that GoAccess populated the database with a bunch of files:
ls /var/lib/goaccess-db/SITE
Setting up the logrotate prerotate hook At this point, we have the wrapper in place. Let's now add a pre-rotate hook so that goaccess-wrapper runs once a day, just before the logs are rotated away. The logrotate config file for Apache2 is located at /etc/logrotate.d/apache2, and for NGINX it's at /etc/logrotate.d/nginx. Among the many things you'll see in this file, here's what is of interest for us: In the config file, there is also this snippet:
prerotate
    if [ -d /etc/logrotate.d/httpd-prerotate ]; then \
        run-parts /etc/logrotate.d/httpd-prerotate; \
    fi; \
endscript
It indicates that scripts in the directory /etc/logrotate.d/httpd-prerotate/ will be executed before the rotation takes place. Refer to the man page run-parts(8) for more details... Putting all of that together, it means that logs from the web server are rotated once a day, and if we want to run scripts just before the rotation, we can just drop them in the httpd-prerotate directory. Simple, right? Let's first create this directory if it doesn't exist:
mkdir -p /etc/logrotate.d/httpd-prerotate/
And let's create a tiny script at /etc/logrotate.d/httpd-prerotate/goaccess:
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#!/bin/sh
exec goaccess-wrapper /tmp/goaccess-reports
Don't forget to make it executable:
chmod +x /etc/logrotate.d/httpd-prerotate/goaccess
As you can see, the only thing that this script does is to invoke the wrapper with the right argument, ie. the output directory for the HTML reports that are generated. And that's all. Now you can just come back tomorrow, check the logs, and make sure that the hook was executed and succeeded. For example, this kind of command will tell you quickly if it worked:
journalctl   grep logrotate
Integration, option B - Run GoAccess once a day, from a systemd service OK so we've just seen how to use a logrotate hook. One downside with that is that we have to drop privileges in the wrapper script, because logrotate runs as root, and we don't want to run GoAccess as root. Hence the rather convoluted syntax with setpriv. Rather than embedding this kind of thing in a wrapper script, we can instead run the wrapper script from a [systemd][] service, and define which user runs the wrapper straight in the systemd service file. Introducing systemd niceties So we can create a systemd service, along with a systemd timer that fires daily. We can then set the user and group that execute the script straight in the systemd service, and there's no need for setpriv anymore. It's a bit more streamlined. We can even go a bit further, and use systemd parameterized units (also called templates), so that we have one service per site (instead of one service that process all of our sites). That will simplify the wrapper script a lot, and it also looks nicer in the logs. With this approach however, it seems that we can't really run exactly before the logs are rotated away, like we did in the section above. But that's OK. What we'll do is that we'll run once a day, no matter the time, and we'll just make sure to process both log files access.log and access.log.1 (ie. the current logs and the logs from yesterday). This way, we're sure not to miss any line from the logs. Note that GoAccess is smart enough to only consider newer entries from the log files, and discard entries that are already in the database. In other words, it's safe to parse the same log file more than once, GoAccess will do the right thing. For more details see "INCREMENTAL LOG PROCESSING" from man goaccess. systemd]: https://freedesktop.org/wiki/Software/systemd/ Implementation And here's how it all looks like. First, a little wrapper script for GoAccess:
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#!/bin/bash
# Usage: $0 SITE DBDIR LOGDIR OUTDIR
set -eu
SITE=$1
DBDIR=$2
LOGDIR=$3
OUTDIR=$4
LOGFILES=()
for ext in log log.1; do
    logfile="$LOGDIR/access.$ext"
    [ -e "$logfile" ] && LOGFILES+=("$logfile")
done
if [ $ #LOGFILES[@]  -eq 0 ]; then
    echo "No log files in '$LOGDIR'"
    exit 0
fi
goaccess \
    --agent-list \
    --anonymize-ip \
    --persist \
    --restore \
    --config-file /etc/goaccess/goaccess.conf \
    --db-path "$DBDIR" \
    --log-format "COMBINED" \
    --output "$OUTDIR/$SITE.html" \
    "$ LOGFILES[@] "
This wrapper does very little. Actually, the only thing it does is to check for the existence of the two log files access.log and access.log.1, to be sure that we don't ask GoAccess to process a file that does not exist (GoAccess would not be happy about that). Save this file under /usr/local/bin/goaccess-wrapper, don't forget to make it executable:
chmod +x /usr/local/bin/goaccess-wrapper
Then, create a systemd parameterized unit file, so that we can run this wrapper as a systemd service. Save it under /etc/systemd/system/goaccess@.service:
[Unit]
Description=Update GoAccess report - %i
ConditionPathIsDirectory=/var/lib/goaccess-db/%i
ConditionPathIsDirectory=/var/log/apache2/%i
ConditionPathIsDirectory=/tmp/goaccess-reports
PartOf=goaccess.service
[Service]
Type=oneshot
User=goaccess
Group=goaccess
Nice=19
ExecStart=/usr/local/bin/goaccess-wrapper \
 %i \
 /var/lib/goaccess-db/%i \
 /var/log/apache2/%i \
 /tmp/goaccess-reports
So, what is a systemd parameterized unit? It's a service to which you can pass an argument when you enable it. The %i in the unit definition will be replaced by this argument. In our case, the argument will be the name of the site that we want to process. As you can see, we use the directive ConditionPathIsDirectory= extensively, so that if ever one of the required directories does not exist, the unit will just be skipped (and marked as such in the logs). It's a graceful way to fail. We run the wrapper as the user and group goaccess, thanks to User= and Group=. We also use Nice= to give a low priority to the process. At this point, it's already possible to test. Just make sure that you created a directory for the GoAccess database:
mkdir -p /var/lib/goaccess-db/SITE
chown goaccess:goaccess /var/lib/goaccess-db/SITE
Also make sure that the output directory exists:
mkdir /tmp/goaccess-reports
chown goaccess:goaccess /tmp/goaccess-reports
Then reload systemd and fire the unit to see if it works:
systemctl daemon-reload
systemctl start goaccess@SITE.service
journalctl   tail
And that should work already. As you can see, the argument, SITE, is passed in the systemctl start command. We just append it after the @, in the name of the unit. Now, let's create another GoAccess service file, which sole purpose is to group all the parameterized units together, so that we can start them all in one go. Note that we don't use a systemd target for that, because ultimately we want to run it once a day, and that would not be possible with a target. So instead we use a dummy oneshot service. So here it is, saved under /etc/systemd/system/goaccess.service:
[Unit]
Description=Update GoAccess reports
Requires= \
 goaccess@SITE1.service \
 goaccess@SITE2.service
[Service]
Type=oneshot
ExecStart=true
As you can see, we simply list the sites that we want to process in the Requires= directive. In this example we have two sites named SITE1 and SITE2. Let's ensure that everything is still good:
systemctl daemon-reload
systemctl start goaccess.service
journalctl   tail
Check the logs, both sites SITE1 and SITE2 should have been processed. And finally, let's create a timer, so that systemd runs goaccess.service once a day. Save it under /etc/systemd/system/goaccess.timer.
[Unit]
Description=Daily update of GoAccess reports
[Timer]
OnCalendar=daily
RandomizedDelaySec=1h
Persistent=true
[Install]
WantedBy=timers.target
Finally, enable the timer:
systemctl daemon-reload
systemctl enable --now goaccess.timer
At this point, everything should be OK. Just come back tomorrow and check the logs with something like:
journalctl   grep goaccess
Last word: if you have only one site to process, of course you can simplify, for example you can hardcode all the paths in the file goaccess.service instead of using a parameterized unit. Up to you. Daily operations So in this part, we assume that you have GoAccess all setup and running, once a day or so. Let's just go over a few things worth noting. Serve your report Up to now in this tutorial, we created the reports in /tmp/goaccess-reports, but that was just for the sake of the example. You will probably want to save your reports in a directory that is served by your web server, so that, well, you can actually look at it in your web browser, that was the point, right? So how to do that is a bit out of scope here, and I guess that if you want to monitor your website, you already have a website, so you will have no trouble serving the GoAccess HTML report. However there's an important detail to be aware of: GoAccess shows all the IP addresses of your visitors in the report. As long as the report is private it's OK, but if ever you make your GoAccess report public, then you should definitely invoke GoAccess with the option --anonymize-ip. Keep an eye on the logs In this tutorial, the reports we create, along with the GoAccess databases, will grow bigger every day, forever. It also means that the GoAccess processing time will grow a bit each day. So maybe the first thing to do is to keep an eye on the logs, to see how long it takes to GoAccess to do its job every day. Also, maybe you'd like to keep an eye on the size of the GoAccess database with:
du -sh /var/lib/goaccess-db/SITE
If your site has few visitors, I suspect it won't be a problem though. You could also be a bit pro-active in preventing this problem in the future, and for example you could break the reports into, say, monthly reports. Meaning that every month, you would create a new database in a new directory, and also start a new HTML report. This way you'd have monthly reports, and you make sure to limit the GoAccess processing time, by limiting the database size to a month. This can be achieved very easily, by including something like YEAR-MONTH in the database directory, and in the HTML report. You can handle that automatically in the wrapper script, for example:
sfx=$(date +'%Y-%m')
mkdir -p $DBDIR/$sfx
goaccess \
    --db-path $DBDIR/$sfx \
    --output "$OUTDIR/$SITE-$sfx.html" \
    ...
You get the idea. Further notes Migration from older versions With the --persist option, GoAccess keeps all the information from the logs in a database, so that it can re-use it later. In prior versions, GoAccess used the Tokyo Cabinet key-value store for that. However starting from v1.4, GoAccess dropped this dependency and now uses its own database format. As a result, the previous database can't be used anymore, you will have to remove it and restart from zero. At the moment there is no way to convert the data from the old database to the new one. If you're interested, this is discussed upstream at [#1783][bug-1783]. Another thing that changed with this new version is the name for some of the command-line options. For example, --load-from-disk was dropped in favor of --restore, and --keep-db-files became --persist. So you'll have to look at the documentation a bit, and update your script(s) accordingly. Other ways to use GoAccess It's also possible to do it completely differently. You could keep GoAccess running, pretty much like a daemon, with the --real-time-html option, and have it process the logs continuously, rather than calling it on a regular basis. It's also possible to see the GoAccess report straight in the terminal, thanks to libncurses, rather than creating a HTML report. And much more, GoAccess is packed with features. Conclusion I hope that this tutorial helped some of you folks. Feel free to drop an e-mail for comments.

Arnaud Rebillout: GoAccess 1.4, a detailed tutorial

GoAccess v1.4 was just released a few weeks ago! Let's take this chance to write a loooong tutorial. We'll go over every steps to install and operate GoAccess. This is a tutorial aimed at those who don't play sysadmin every day, and that's why it's so long, I did my best to provide thorough explanations all along, so that it's more than just a "copy-and-paste" kind of tutorial. And for those who do play sysadmin everyday: please try not to fall asleep while reading, and don't hesitate to drop me an e-mail if you spot anything inaccurate in here. Thanks! Introduction So what's GoAccess already? GoAccess is a web log analyzer, and it allows you to visualize the traffic for your website, and get to know a bit more about your visitors: how many visitors and hits, for which pages, coming from where (geolocation, operating system, web browser...), etc... It does so by parsing the access logs from your web server, be it Apache, NGINX or whatever. GoAccess gives you different options to display the statistics, and in this tutorial we'll focus on producing a HTML report. Meaning that you can see the statistics for your website straight in your web browser, under the form of a single HTML page. For an example, you can have a look at the stats of my blog here: https://goaccess.arnaudr.io. GoAccess is written in C, it has very few dependencies, it had been around for about 10 years, and it's distributed under the MIT license. Assumptions This tutorial is about installing and configuring, so I'll assume that all the commands are run as root. I won't prefix each of them with sudo. I use the Apache web server, running on a Debian system. I don't think it matters so much for this tutorial though. If you're using NGINX it's fine, you can keep reading. Also, I will just use the name SITE for the name of the website that we want to analyze with GoAccess. Just replace that with the real name of your site. I also assume the following locations for your stuff: If you have your stuff in /srv/SITE/ log,www instead, no worries, just adjust the paths accordingly, I bet you can do it. Installation The latest version of GoAccess is v1.4, and it's not yet available in the Debian repositories. So for this part, you can follow the instructions from the official GoAccess download page. Install steps are explained in details, so there's nothing left for me to say :) When this is done, let's get started with the basics. We're talking about the latest version v1.4 here, let's make sure:
$ goaccess --version
GoAccess - 1.4.
...
Now let's try to create a HTML report. I assume that you already have a website up and running. GoAccess needs to parse the access logs. These logs are optional, they might or might not be created by your web server, depending on how it's configured. Usually, these log files are named access.log, unsurprisingly. You can check if those logs exist on your system by running this command:
find /var/log -name access.log
Another important thing to know is that these logs can be in different formats. In this tutorial we'll assume that we work with the combined log format, because it seems to be the most common default. To check what kind of access logs your web server produces, you must look at the configuration for your site. For an Apache web server, you should have such a line in the file /etc/apache2/sites-enabled/SITE.conf:
CustomLog $ APACHE_LOG_DIR /SITE/access.log combined
For NGINX, it's quite similar. The configuration file would be something like /etc/nginx/sites-enabled/SITE, and the line to enable access logs would be something like:
access_log /var/log/nginx/SITE/access.log
Note that NGINX writes the access logs in the combined format by default, that's why you don't see the word combined anywhere in the line above: it's implicit. Alright, so from now on we assume that yes, you have access log files available, and yes, they are in the combined log format. If that's the case, then you can already run GoAccess and generate a report, for example for the log file /var/log/apache2/access.log
goaccess \
    --log-format COMBINED \
    --output /tmp/report.html \
    /var/log/apache2/access.log
It's possible to give GoAccess more than one log files to process, so if you have for example the file access.log.1 around, you can use it as well:
goaccess \
    --log-format COMBINED \
    --output /tmp/report.html \
    /var/log/apache2/access.log \
    /var/log/apache2/access.log.1
If GoAccess succeeds (and it should), you're on the right track! All is left to do to complete this test is to have a look at the HTML report created. It's a single HTML page, so you can easily scp it to your machine, or just move it to the document root of your site, and then open it in your web browser. Looks good? So let's move on to more interesting things. Web server configuration This part is very short, because in terms of configuration of the web server, there's very little to do. As I said above, the only thing you want from the web server is to create access log files. Then you want to be sure that GoAccess and your web server agree on the format for these files. In the part above we used the combined log format, but GoAccess supports many other common log formats out of the box, and even allows you to parse custom log formats. For more details, refer to the option --log-format in the GoAccess manual page. Another common log format is named, well, common. It even has its own Wikipedia page. But compared to combined, the common log format contains less information, it doesn't include the referrer and user-agent values, meaning that you won't have it in the GoAccess report. So at this point you should understand that, unsurprisingly, GoAccess can only tell you about what's in the access logs, no more no less. And that's all in term of web server configuration. Configuration to run GoAccess unprivileged Now we're going to create a user and group for GoAccess, so that we don't have to run it as root. The reason is that, well, for everything running unattended on your server, the less code runs as root, the better. It's good practice and common sense. In this case, GoAccess is simply a log analyzer. So it just needs to read the logs files from your web server, and there is no need to be root for that, an unprivileged user can do the job just as well, assuming it has read permissions on /var/log/apache2 or /var/log/nginx. The log files of the web server are usually part of the adm group (though it might depend on your distro, I'm not sure). This is something you can check easily with the following command:
ls -l /var/log   grep -e apache2 -e nginx
As a result you should get something like that:
drwxr-x--- 2 root adm 20480 Jul 22 00:00 /var/log/apache2/
And as you can see, the directory apache2 belongs to the group adm. It means that you don't need to be root to read the logs, instead any unprivileged user that belongs to the group adm can do it. So, let's create the goaccess user, and add it to the adm group:
adduser --system --group --no-create-home goaccess
addgroup goaccess adm
And now, let's run GoAccess unprivileged, and verify that it can still read the log files:
setpriv \
    --reuid=goaccess --regid=goaccess \
    --init-groups --inh-caps=-all \
    -- \
    goaccess \
    --log-format COMBINED \
    --output /tmp/report2.html \
    /var/log/apache2/access.log
setpriv is the command used to drop privileges. The syntax is quite verbose, it's not super friendly for tutorials, but don't be scared and read the manual page to learn what it does. In any case, this command should work, and at this point, it means that you have a goaccess user ready, and we'll use it to run GoAccess unprivileged. Integration, option A - Run GoAccess once a day, from a logrotate hook In this part we wire things together, so that GoAccess processes the log files once a day, adds the new logs to its internal database, and generates a report from all that aggregated data. The result will be a single HTML page. Introducing logrotate In order to do that, we'll use a logrotate hook. logrotate is a little tool that should already be installed on your server, and that runs once a day, and that is in charge of rotating the log files. "Rotating the logs" means moving access.log to access.log.1 and so on. With logrotate, a new log file is created every day, and log files that are too old are deleted. That's what prevents your logs from filling up your disk basically :) You can check that logrotate is indeed installed and enabled with this command (assuming that your init system is systemd):
systemctl status logrotate.timer
What's interesting for us is that logrotate allows you to run scripts before and after the rotation is performed, so it's an ideal place from where to run GoAccess. In short, we want to run GoAccess just before the logs are rotated away, in the prerotate hook. But let's do things in order. At first, we need to write a little wrapper script that will be in charge of running GoAccess with the right arguments, and that will process all of your sites. The wrapper script This wrapper is made to process more than one site, but if you have only one site it works just as well, of course. So let me just drop it on you like that, and I'll explain afterward. Here's my wrapper script:
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#!/bin/bash
# Process log files /var/www/apache2/SITE/access.log,
# only if /var/lib/goaccess-db/SITE exists.
# Create HTML reports in $1, a directory that must exist.
set -eu
OUTDIR=
LOGDIR=/var/log/apache2
DBDIR=/var/lib/goaccess-db
fail()   echo >&2 "$@"; exit 1;  
[ $# -eq 1 ]   fail "Usage: $(basename $0) OUTPUT_DIRECTORY"
OUTDIR=$1
[ -d "$OUTDIR" ]   fail "'$OUTDIR' is not a directory"
[ -d "$LOGDIR" ]   fail "'$LOGDIR' is not a directory"
[ -d "$DBDIR"  ]   fail "'$DBDIR' is not a directory"
for d in $(find "$LOGDIR" -mindepth 1 -maxdepth 1 -type d); do
    site=$(basename "$sitedir")
    dbdir=$DBDIR/$site
    logfile=$d/access.log
    outfile=$OUTDIR/$site.html
    if [ ! -d "$dbdir" ]   [ ! -e "$logfile" ]; then
        echo "  Skipping site '$site'"
        continue
    else
        echo "  Processing site '$site'"
    fi
    setpriv \
        --reuid=goaccess --regid=goaccess \
        --init-groups --inh-caps=-all \
        -- \
    goaccess \
        --agent-list \
        --anonymize-ip \
        --persist \
        --restore \
        --config-file /etc/goaccess/goaccess.conf \
        --db-path "$dbdir" \
        --log-format "COMBINED" \
        --output "$outfile" \
        "$logfile"
done
So you'd install this script at /usr/local/bin/goaccess-wrapper for example, and make it executable:
chmod +x /usr/local/bin/goaccess-wrapper
A few things to note: As is, the script makes the assumption that the logs for your site are logged in a sub-directory /var/log/apache2/SITE/. If it's not the case, adjust that in the wrapper accordingly. The name of this sub-directory is then used to find the GoAccess database directory /var/lib/goaccess-db/SITE/. This directory is expected to exist, meaning that if you don't create it yourself, the wrapper won't process this particular site. It's a simple way to control which sites are processed by this GoAccess wrapper, and which sites are not. So if you want goaccess-wrapper to process the site SITE, just create a directory with the name of this site under /var/lib/goaccess-db:
mkdir -p /var/lib/goaccess-db/SITE
chown goaccess:goaccess /var/lib/goaccess-db/SITE
Now let's create an output directory:
mkdir /tmp/goaccess-reports
chown goaccess:goaccess /tmp/goaccess-reports
And let's give a try to the wrapper script:
goaccess-wrapper /tmp/goaccess-reports
ls /tmp/goaccess-reports
Which should give you:
SITE.html
At the same time, you can check that GoAccess populated the database with a bunch of files:
ls /var/lib/goaccess-db/SITE
Setting up the logrotate prerotate hook At this point, we have the wrapper in place. Let's now add a pre-rotate hook so that goaccess-wrapper runs once a day, just before the logs are rotated away. The logrotate config file for Apache2 is located at /etc/logrotate.d/apache2, and for NGINX it's at /etc/logrotate.d/nginx. Among the many things you'll see in this file, here's what is of interest for us: In the config file, there is also this snippet:
prerotate
    if [ -d /etc/logrotate.d/httpd-prerotate ]; then \
        run-parts /etc/logrotate.d/httpd-prerotate; \
    fi; \
endscript
It indicates that scripts in the directory /etc/logrotate.d/httpd-prerotate/ will be executed before the rotation takes place. Refer to the man page run-parts(8) for more details... Putting all of that together, it means that logs from the web server are rotated once a day, and if we want to run scripts just before the rotation, we can just drop them in the httpd-prerotate directory. Simple, right? Let's first create this directory if it doesn't exist:
mkdir -p /etc/logrotate.d/httpd-prerotate/
And let's create a tiny script at /etc/logrotate.d/httpd-prerotate/goaccess:
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2
#!/bin/sh
exec goaccess-wrapper /tmp/goaccess-reports
Don't forget to make it executable:
chmod +x /etc/logrotate.d/httpd-prerotate/goaccess
As you can see, the only thing that this script does is to invoke the wrapper with the right argument, ie. the output directory for the HTML reports that are generated. And that's all. Now you can just come back tomorrow, check the logs, and make sure that the hook was executed and succeeded. For example, this kind of command will tell you quickly if it worked:
journalctl   grep logrotate
Integration, option B - Run GoAccess once a day, from a systemd service OK so we've just seen how to use a logrotate hook. One downside with that is that we have to drop privileges in the wrapper script, because logrotate runs as root, and we don't want to run GoAccess as root. Hence the rather convoluted syntax with setpriv. Rather than embedding this kind of thing in a wrapper script, we can instead run the wrapper script from a [systemd][] service, and define which user runs the wrapper straight in the systemd service file. Introducing systemd niceties So we can create a systemd service, along with a systemd timer that fires daily. We can then set the user and group that execute the script straight in the systemd service, and there's no need for setpriv anymore. It's a bit more streamlined. We can even go a bit further, and use systemd parameterized units (also called templates), so that we have one service per site (instead of one service that process all of our sites). That will simplify the wrapper script a lot, and it also looks nicer in the logs. With this approach however, it seems that we can't really run exactly before the logs are rotated away, like we did in the section above. But that's OK. What we'll do is that we'll run once a day, no matter the time, and we'll just make sure to process both log files access.log and access.log.1 (ie. the current logs and the logs from yesterday). This way, we're sure not to miss any line from the logs. Note that GoAccess is smart enough to only consider newer entries from the log files, and discard entries that are already in the database. In other words, it's safe to parse the same log file more than once, GoAccess will do the right thing. For more details see "INCREMENTAL LOG PROCESSING" from man goaccess. systemd]: https://freedesktop.org/wiki/Software/systemd/ Implementation And here's how it all looks like. First, a little wrapper script for GoAccess:
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#!/bin/bash
# Usage: $0 SITE DBDIR LOGDIR OUTDIR
set -eu
SITE=$1
DBDIR=$2
LOGDIR=$3
OUTDIR=$4
LOGFILES=()
for ext in log log.1; do
    logfile="$LOGDIR/access.$ext"
    [ -e "$logfile" ] && LOGFILES+=("$logfile")
done
if [ $ #LOGFILES[@]  -eq 0 ]; then
    echo "No log files in '$LOGDIR'"
    exit 0
fi
goaccess \
    --agent-list \
    --anonymize-ip \
    --persist \
    --restore \
    --config-file /etc/goaccess/goaccess.conf \
    --db-path "$DBDIR" \
    --log-format "COMBINED" \
    --output "$OUTDIR/$SITE.html" \
    "$ LOGFILES[@] "
This wrapper does very little. Actually, the only thing it does is to check for the existence of the two log files access.log and access.log.1, to be sure that we don't ask GoAccess to process a file that does not exist (GoAccess would not be happy about that). Save this file under /usr/local/bin/goaccess-wrapper, don't forget to make it executable:
chmod +x /usr/local/bin/goaccess-wrapper
Then, create a systemd parameterized unit file, so that we can run this wrapper as a systemd service. Save it under /etc/systemd/system/goaccess@.service:
[Unit]
Description=Update GoAccess report - %i
ConditionPathIsDirectory=/var/lib/goaccess-db/%i
ConditionPathIsDirectory=/var/log/apache2/%i
ConditionPathIsDirectory=/tmp/goaccess-reports
PartOf=goaccess.service
[Service]
Type=oneshot
User=goaccess
Group=goaccess
Nice=19
ExecStart=/usr/local/bin/goaccess-wrapper \
 %i \
 /var/lib/goaccess-db/%i \
 /var/log/apache2/%i \
 /tmp/goaccess-reports
So, what is a systemd parameterized unit? It's a service to which you can pass an argument when you enable it. The %i in the unit definition will be replaced by this argument. In our case, the argument will be the name of the site that we want to process. As you can see, we use the directive ConditionPathIsDirectory= extensively, so that if ever one of the required directories does not exist, the unit will just be skipped (and marked as such in the logs). It's a graceful way to fail. We run the wrapper as the user and group goaccess, thanks to User= and Group=. We also use Nice= to give a low priority to the process. At this point, it's already possible to test. Just make sure that you created a directory for the GoAccess database:
mkdir -p /var/lib/goaccess-db/SITE
chown goaccess:goaccess /var/lib/goaccess-db/SITE
Also make sure that the output directory exists:
mkdir /tmp/goaccess-reports
chown goaccess:goaccess /tmp/goaccess-reports
Then reload systemd and fire the unit to see if it works:
systemctl daemon-reload
systemctl start goaccess@SITE.service
journalctl   tail
And that should work already. As you can see, the argument, SITE, is passed in the systemctl start command. We just append it after the @, in the name of the unit. Now, let's create another GoAccess service file, which sole purpose is to group all the parameterized units together, so that we can start them all in one go. Note that we don't use a systemd target for that, because ultimately we want to run it once a day, and that would not be possible with a target. So instead we use a dummy oneshot service. So here it is, saved under /etc/systemd/system/goaccess.service:
[Unit]
Description=Update GoAccess reports
Requires= \
 goaccess@SITE1.service \
 goaccess@SITE2.service
[Service]
Type=oneshot
ExecStart=true
As you can see, we simply list the sites that we want to process in the Requires= directive. In this example we have two sites named SITE1 and SITE2. Let's ensure that everything is still good:
systemctl daemon-reload
systemctl start goaccess.service
journalctl   tail
Check the logs, both sites SITE1 and SITE2 should have been processed. And finally, let's create a timer, so that systemd runs goaccess.service once a day. Save it under /etc/systemd/system/goaccess.timer.
[Unit]
Description=Daily update of GoAccess reports
[Timer]
OnCalendar=daily
RandomizedDelaySec=1h
Persistent=true
[Install]
WantedBy=timers.target
Finally, enable the timer:
systemctl daemon-reload
systemctl enable --now goaccess.timer
At this point, everything should be OK. Just come back tomorrow and check the logs with something like:
journalctl   grep goaccess
Last word: if you have only one site to process, of course you can simplify, for example you can hardcode all the paths in the file goaccess.service instead of using a parameterized unit. Up to you. Daily operations So in this part, we assume that you have GoAccess all setup and running, once a day or so. Let's just go over a few things worth noting. Serve your report Up to now in this tutorial, we created the reports in /tmp/goaccess-reports, but that was just for the sake of the example. You will probably want to save your reports in a directory that is served by your web server, so that, well, you can actually look at it in your web browser, that was the point, right? So how to do that is a bit out of scope here, and I guess that if you want to monitor your website, you already have a website, so you will have no trouble serving the GoAccess HTML report. However there's an important detail to be aware of: GoAccess shows all the IP addresses of your visitors in the report. As long as the report is private it's OK, but if ever you make your GoAccess report public, then you should definitely invoke GoAccess with the option --anonymize-ip. Keep an eye on the logs In this tutorial, the reports we create, along with the GoAccess databases, will grow bigger every day, forever. It also means that the GoAccess processing time will grow a bit each day. So maybe the first thing to do is to keep an eye on the logs, to see how long it takes to GoAccess to do its job every day. Also, maybe you'd like to keep an eye on the size of the GoAccess database with:
du -sh /var/lib/goaccess-db/SITE
If your site has few visitors, I suspect it won't be a problem though. You could also be a bit pro-active in preventing this problem in the future, and for example you could break the reports into, say, monthly reports. Meaning that every month, you would create a new database in a new directory, and also start a new HTML report. This way you'd have monthly reports, and you make sure to limit the GoAccess processing time, by limiting the database size to a month. This can be achieved very easily, by including something like YEAR-MONTH in the database directory, and in the HTML report. You can handle that automatically in the wrapper script, for example:
sfx=$(date +'%Y-%m')
mkdir -p $DBDIR/$sfx
goaccess \
    --db-path $DBDIR/$sfx \
    --output "$OUTDIR/$SITE-$sfx.html" \
    ...
You get the idea. Further notes Migration from older versions With the --persist option, GoAccess keeps all the information from the logs in a database, so that it can re-use it later. In prior versions, GoAccess used the Tokyo Cabinet key-value store for that. However starting from v1.4, GoAccess dropped this dependency and now uses its own database format. As a result, the previous database can't be used anymore, you will have to remove it and restart from zero. At the moment there is no way to convert the data from the old database to the new one. If you're interested, this is discussed upstream at [#1783][bug-1783]. Another thing that changed with this new version is the name for some of the command-line options. For example, --load-from-disk was dropped in favor of --restore, and --keep-db-files became --persist. So you'll have to look at the documentation a bit, and update your script(s) accordingly. Other ways to use GoAccess It's also possible to do it completely differently. You could keep GoAccess running, pretty much like a daemon, with the --real-time-html option, and have it process the logs continuously, rather than calling it on a regular basis. It's also possible to see the GoAccess report straight in the terminal, thanks to libncurses, rather than creating a HTML report. And much more, GoAccess is packed with features. Conclusion I hope that this tutorial helped some of you folks. Feel free to drop an e-mail for comments.

8 August 2020

Reproducible Builds: Reproducible Builds in July 2020

Welcome to the July 2020 report from the Reproducible Builds project. In these monthly reports, we round-up the things that we have been up to over the past month. As a brief refresher, the motivation behind the Reproducible Builds effort is to ensure no flaws have been introduced from the original free software source code to the pre-compiled binaries we install on our systems. (If you re interested in contributing to the project, please visit our main website.)

General news At the upcoming DebConf20 conference (now being held online), Holger Levsen will present a talk on Thursday 27th August about Reproducing Bullseye in practice , focusing on independently verifying that the binaries distributed from ftp.debian.org were made from their claimed sources. Tavis Ormandy published a blog post making the provocative claim that You don t need reproducible builds , asserting elsewhere that the many attacks that have been extensively reported in our previous reports are fantasy threat models . A number of rebuttals have been made, including one from long-time contributor Reproducible Builds contributor Bernhard Wiedemann. On our mailing list this month, Debian Developer Graham Inggs posted to our list asking for ideas why the openorienteering-mapper Debian package was failing to build on the Reproducible Builds testing framework. Chris Lamb remarked from the build logs that the package may be missing a build dependency, although Graham then used our own diffoscope tool to show that the resulting package remains unchanged with or without it. Later, Nico Tyni noticed that the build failure may be due to the relationship between the FILE C preprocessor macro and the -ffile-prefix-map GCC flag. An issue in Zephyr, a small-footprint kernel designed for use on resource-constrained systems, around .a library files not being reproducible was closed after it was noticed that a key part of their toolchain was updated that now calls --enable-deterministic-archives by default. Reproducible Builds developer kpcyrd commented on a pull request against the libsodium cryptographic library wrapper for Rust, arguing against the testing of CPU features at compile-time. He noted that:
I ve accidentally shipped broken updates to users in the past because the build system was feature-tested and the final binary assumed the instructions would be present without further runtime checks
David Kleuker also asked a question on our mailing list about using SOURCE_DATE_EPOCH with the install(1) tool from GNU coreutils. When comparing two installed packages he noticed that the filesystem birth times differed between them. Chris Lamb replied, realising that this was actually a consequence of using an outdated version of diffoscope and that a fix was in diffoscope version 146 released in May 2020. Later in July, John Scott posted asking for clarification regarding on the Javascript files on our website to add metadata for LibreJS, the browser extension that blocks non-free Javascript scripts from executing. Chris Lamb investigated the issue and realised that we could drop a number of unused Javascript files [ ][ ][ ] and added unminified versions of Bootstrap and jQuery [ ].

Development work

Website On our website this month, Chris Lamb updated the main Reproducible Builds website and documentation to drop a number of unused Javascript files [ ][ ][ ] and added unminified versions of Bootstrap and jQuery [ ]. He also fixed a number of broken URLs [ ][ ]. Gonzalo Bulnes Guilpain made a large number of grammatical improvements [ ][ ][ ][ ][ ] as well as some misspellings, case and whitespace changes too [ ][ ][ ]. Lastly, Holger Levsen updated the README file [ ], marked the Alpine Linux continuous integration tests as currently disabled [ ] and linked the Arch Linux Reproducible Status page from our projects page [ ].

diffoscope diffoscope is our in-depth and content-aware diff utility that can not only locate and diagnose reproducibility issues, it provides human-readable diffs of all kinds. In July, Chris Lamb made the following changes to diffoscope, including releasing versions 150, 151, 152, 153 & 154:
  • New features:
    • Add support for flash-optimised F2FS filesystems. (#207)
    • Don t require zipnote(1) to determine differences in a .zip file as we can use libarchive. [ ]
    • Allow --profile as a synonym for --profile=-, ie. write profiling data to standard output. [ ]
    • Increase the minimum length of the output of strings(1) to eight characters to avoid unnecessary diff noise. [ ]
    • Drop some legacy argument styles: --exclude-directory-metadata and --no-exclude-directory-metadata have been replaced with --exclude-directory-metadata= yes,no . [ ]
  • Bug fixes:
    • Pass the absolute path when extracting members from SquashFS images as we run the command with working directory in a temporary directory. (#189)
    • Correct adding a comment when we cannot extract a filesystem due to missing libguestfs module. [ ]
    • Don t crash when listing entries in archives if they don t have a listed size such as hardlinks in ISO images. (#188)
  • Output improvements:
    • Strip off the file offset prefix from xxd(1) and show bytes in groups of 4. [ ]
    • Don t emit javap not found in path if it is available in the path but it did not result in an actual difference. [ ]
    • Fix ... not available in path messages when looking for Java decompilers that used the Python class name instead of the command. [ ]
  • Logging improvements:
    • Add a bit more debugging info when launching libguestfs. [ ]
    • Reduce the --debug log noise by truncating the has_some_content messages. [ ]
    • Fix the compare_files log message when the file does not have a literal name. [ ]
  • Codebase improvements:
    • Rewrite and rename exit_if_paths_do_not_exist to not check files multiple times. [ ][ ]
    • Add an add_comment helper method; don t mess with our internal list directly. [ ]
    • Replace some simple usages of str.format with Python f-strings [ ] and make it easier to navigate to the main.py entry point [ ].
    • In the RData comparator, always explicitly return None in the failure case as we return a non-None value in the success one. [ ]
    • Tidy some imports [ ][ ][ ] and don t alias a variable when we do not use it. [ ]
    • Clarify the use of a separate NullChanges quasi-file to represent missing data in the Debian package comparator [ ] and clarify use of a null diff in order to remember an exit code. [ ]
  • Other changes:
    • Profile the launch of libguestfs filesystems. [ ]
    • Clarify and correct our contributing info. [ ][ ][ ][ ][ ][ ]
Jean-Romain Garnier also made the following changes:
  • Allow passing a file with a list of arguments via diffoscope @args.txt. (!62)
  • Improve the output of side-by-side diffs by detecting added lines better. (!64)
  • Remove offsets before instructions in objdump [ ][ ] and remove raw instructions from ELF tests [ ].

Other tools strip-nondeterminism is our tool to remove specific non-deterministic results from a completed build. It is used automatically in most Debian package builds. In July, Chris Lamb ensured that we did not install the internal handler documentation generated from Perl POD documents [ ] and fixed a trivial typo [ ]. Marc Herbert added a --verbose-level warning when the Archive::Cpio Perl module is missing. (!6) reprotest is our end-user tool to build same source code twice in widely differing environments and then checks the binaries produced by each build for any differences. This month, Vagrant Cascadian made a number of changes to support diffoscope version 153 which had removed the (deprecated) --exclude-directory-metadata and --no-exclude-directory-metadata command-line arguments, and updated the testing configuration to also test under Python version 3.8 [ ].

Distributions

Debian In June 2020, Timo R hling filed a wishlist bug against the debhelper build tool impacting the reproducibility status of hundreds of packages that use the CMake build system. This month however, Niels Thykier uploaded debhelper version 13.2 that passes the -DCMAKE_SKIP_RPATH=ON and -DBUILD_RPATH_USE_ORIGIN=ON arguments to CMake when using the (currently-experimental) Debhelper compatibility level 14. According to Niels, this change:
should fix some reproducibility issues, but may cause breakage if packages run binaries directly from the build directory.
34 reviews of Debian packages were added, 14 were updated and 20 were removed this month adding to our knowledge about identified issues. Chris Lamb added and categorised the nondeterministic_order_of_debhelper_snippets_added_by_dh_fortran_mod [ ] and gem2deb_install_mkmf_log [ ] toolchain issues. Lastly, Holger Levsen filed two more wishlist bugs against the debrebuild Debian package rebuilder tool [ ][ ].

openSUSE In openSUSE, Bernhard M. Wiedemann published his monthly Reproducible Builds status update. Bernhard also published the results of performing 12,235 verification builds of packages from openSUSE Leap version 15.2 and, as a result, created three pull requests against the openSUSE Build Result Compare Script [ ][ ][ ].

Other distributions In Arch Linux, there was a mass rebuild of old packages in an attempt to make them reproducible. This was performed because building with a previous release of the pacman package manager caused file ordering and size calculation issues when using the btrfs filesystem. A system was also implemented for Arch Linux packagers to receive notifications if/when their package becomes unreproducible, and packagers now have access to a dashboard where they can all see all their unreproducible packages (more info). Paul Spooren sent two versions of a patch for the OpenWrt embedded distribution for adding a build system revision to the packages manifest so that all external feeds can be rebuilt and verified. [ ][ ]

Upstream patches The Reproducible Builds project detects, dissects and attempts to fix as many currently-unreproducible packages as possible. We endeavour to send all of our patches upstream where appropriate. This month, we wrote a large number of these patches, including: Vagrant Cascadian also reported two issues, the first regarding a regression in u-boot boot loader reproducibility for a particular target [ ] and a non-deterministic segmentation fault in the guile-ssh test suite [ ]. Lastly, Jelle van der Waa filed a bug against the MeiliSearch search API to report that it embeds the current build date.

Testing framework We operate a large and many-featured Jenkins-based testing framework that powers tests.reproducible-builds.org. This month, Holger Levsen made the following changes:
  • Debian-related changes:
    • Tweak the rescheduling of various architecture and suite combinations. [ ][ ]
    • Fix links for 404 and not for us icons. (#959363)
    • Further work on a rebuilder prototype, for example correctly processing the sbuild exit code. [ ][ ]
    • Update the sudo configuration file to allow the node health job to work correctly. [ ]
    • Add php-horde packages back to the pkg-php-pear package set for the bullseye distribution. [ ]
    • Update the version of debrebuild. [ ]
  • System health check development:
    • Add checks for broken SSH [ ], logrotate [ ], pbuilder [ ], NetBSD [ ], unkillable processes [ ], unresponsive nodes [ ][ ][ ][ ], proxy connection failures [ ], too many installed kernels [ ], etc.
    • Automatically fix some failed systemd units. [ ]
    • Add notes explaining all the issues that hosts are experiencing [ ] and handle zipped job log files correctly [ ].
    • Separate nodes which have been automatically marked as down [ ] and show status icons for jobs with issues [ ].
  • Misc:
    • Disable all Alpine Linux jobs until they are or Alpine is fixed. [ ]
    • Perform some general upkeep of build nodes hosted by OSUOSL. [ ][ ][ ][ ]
In addition, Mattia Rizzolo updated the init_node script to suggest using sudo instead of explicit logout and logins [ ][ ] and the usual build node maintenance was performed by Holger Levsen [ ][ ][ ][ ][ ][ ], Mattia Rizzolo [ ][ ] and Vagrant Cascadian [ ][ ][ ][ ].

If you are interested in contributing to the Reproducible Builds project, please visit our Contribute page on our website. However, you can get in touch with us via:

6 August 2020

Christian Kastner: My new favorite utility: autojump

Like any developer, I have amassed an impressive collection of directory trees both broad and deep. Navigating these trees became increasingly cumbersome, and setting CDPATH, using auto-completion, and working with the readline history search alleviated this only somewhat. Enter autojump, from the package of the same name. Whatever magic it uses is unbelievably effective. I estimate that in at least 95% of my cases, typing j <name-fragment> changes to the directory I was actually thinking of. Say I'm working on package scikit-learn. My clone of the Salsa repo is in ~/code/pkg-scikit-learn/scikit-learn. Changing to that directory is trivial, I only need to specify a name fragment:
$ j sci
/home/christian/code/pkg-scikit-learn/scikit-learn
christian@workstation:~/code/pkg-scikit-learn/scikit-learn
But what if I want to work on scikit-learn upstream, to prepare a patch, for example? That repo has been cloned to ~/code/github/scikit-learn. No problem at all, just add another name fragment:
$ j gi sci
/home/christian/code/github/scikit-learn
christian@workstation:~/code/github/scikit-learn
The magic, however, is most evident with directory trees I rarely enter. As in: I have a good idea of the directory name I wish to change to, but I don't really recall its exact name, nor where (in the tree) it is located. I used to rely on autocomplete to somehow get there which can involve hitting the [TAB] key far too many times, and falling back to find in the worst case, but now, autojump always seems gets me there on first try. I can't believe that this has been available in Debian for 10 years and I only discovered it now.

5 August 2020

Holger Levsen: 20200805-debconf7

DebConf7 This tshirt is 13 years old and from DebConf7. DebConf7 was my 5th DebConf and took place in Edinburgh, Scotland. And finally I could tell people I was a DD :-D Though as you can guess, that's yet another story to be told. So anyway, Edinburgh. I don't recall exactly whether the video team had to record 6 or 7 talk rooms on 4 floors, but this was probably the most intense set up we ran. And we ran a lot, from floor to floor, and room to room. DebConf7 was also special because it had a very special night venue, which was in an ex-church in a rather normal building, operated as sort of community center or some such, while the old church interior was still very much visible as in everything new was build around the old stuff. And while the night venue was cool, it also ment we (video team) had no access to our machines over night (or for much of the evening), because we had to leave the university over night and the networking situation didn't allow remote access with the bandwidth needed to do anything video. The night venue had some very simple house rules, like don't rearrange stuff, don't break stuff, don't fix stuff and just a few little more and of course we broke them in the best possible way: Toresbe with the help of people I don't remember fixed the organ, which was broken for decades. And so the house sounded in some very nice new old tune and I think everybody was happy we broke that rule. I believe the city is really nice from the little I've seen of it. A very nice old town, a big castle on the hill :) I'm not sure whether I missed the day trip to Glasgow to fix video things or to rest or both... Another thing I missed was getting a kilt, for which Phil Hands made a terrific design (update: the design is called tartan and was made by Phil indeed!), which spelled Debian in morse code. That was pretty cool and the kilts are really nice on DebConf group pictures since then. And if you've been wearing this kilt regularily for the last 13 years it was probably also a sensible investment. ;) It seems I don't have that many more memories of this DebConf, British power plugs and how to hack them comes to my mind and some other stuff here and there, but I remember less than previous years. I'm blaming this on the intense video setup and also on the sheer amount of people, which was the hightest until then and for some years, I believe maybe even until Heidelberg 8 years later. IIRC there were around 470 people there and over my first five years of DebConf I was incredible lucky to make many friends in Debian, so I probably just hung out and had good times.

3 August 2020

Sylvain Beucler: Debian LTS and ELTS - July 2020

Debian LTS Logo Here is my transparent report for my work on the Debian Long Term Support (LTS) and Debian Extended Long Term Support (ELTS), which extend the security support for past Debian releases, as a paid contributor. In July, the monthly sponsored hours were split evenly among contributors depending on their max availability - I was assigned 25.25h for LTS (out of 30 max; all done) and 13.25h for ELTS (out of 20 max; all done). We shifted suites: welcome Stretch LTS and Jessie ELTS. The LTS->ELTS switch happened at the start of the month, but the oldstable->LTS switch happened later (after finalizing and flushing proposed-updates to a last point release), causing some confusion but nothing major. ELTS - Jessie LTS - Stretch Documentation/Scripts

Arnaud Rebillout: GoAccess 1.4, a detailed tutorial

GoAccess v1.4 was just released a few weeks ago! Let's take this chance to write a loooong tutorial. We'll go over every steps to install and operate GoAccess. This is a tutorial aimed at those who don't play sysadmin every day, and that's why it's so long, I did my best to provide thorough explanations all along, so that it's more than just a "copy-and-paste" kind of tutorial. And for those who do play sysadmin everyday: please try not to fall asleep while reading, and don't hesitate to drop me an e-mail if you spot anything inaccurate in here. Thanks! Introduction So what's GoAccess already? GoAccess is a web log analyzer, and it allows you to visualize the traffic for your website, and get to know a bit more about your visitors: how many visitors and hits, for which pages, coming from where (geolocation, operating system, web browser...), etc... It does so by parsing the access logs from your web server, be it Apache, NGINX or whatever. GoAccess gives you different options to display the statistics, and in this tutorial we'll focus on producing a HTML report. Meaning that you can see the statistics for your website straight in your web browser, under the form of a single HTML page. For an example, you can have a look at the stats of my blog here: http://goaccess.arnaudr.io. GoAccess is written in C, it has very few dependencies, it had been around for about 10 years, and it's distributed under the MIT license. Assumptions This tutorial is about installing and configuring, so I'll assume that all the commands are run as root. I won't prefix each of them with sudo. I use the Apache web server, running on a Debian system. I don't think it matters so much for this tutorial though. If you're using NGINX it's fine, you can keep reading. Also, I will just use the name SITE for the name of the website that we want to analyze with GoAccess. Just replace that with the real name of your site. I also assume the following locations for your stuff: If you have your stuff in /srv/SITE/ log,www instead, no worries, just adjust the paths accordingly, I bet you can do it. Installation The latest version of GoAccess is v1.4, and it's not yet available in the Debian repositories. So for this part, you can follow the instructions from the official GoAccess download page. Install steps are explained in details, so there's nothing left for me to say :) When this is done, let's get started with the basics. We're talking about the latest version v1.4 here, let's make sure:
$ goaccess --version
GoAccess - 1.4.
...
Now let's try to create a HTML report. I assume that you already have a website up and running. GoAccess needs to parse the access logs. These logs are optional, they might or might not be created by your web server, depending on how it's configured. Usually, these log files are named access.log, unsurprisingly. You can check if those logs exist on your system by running this command:
find /var/log -name access.log
Another important thing to know is that these logs can be in different formats. In this tutorial we'll assume that we work with the combined log format, because it seems to be the most common default. To check what kind of access logs your web server produces, you must look at the configuration for your site. For an Apache web server, you should have such a line in the file /etc/apache2/sites-enabled/SITE.conf:
CustomLog $ APACHE_LOG_DIR /SITE/access.log combined
For NGINX, it's quite similar. The configuration file would be something like /etc/nginx/sites-enabled/SITE, and the line to enable access logs would be something like:
access_log /var/log/nginx/SITE/access.log
Note that NGINX writes the access logs in the combined format by default, that's why you don't see the word combined anywhere in the line above: it's implicit. Alright, so from now on we assume that yes, you have access log files available, and yes, they are in the combined log format. If that's the case, then you can already run GoAccess and generate a report, for example for the log file /var/log/apache2/access.log
goaccess \
    --log-format COMBINED \
    --output /tmp/report.html \
    /var/log/apache2/access.log
It's possible to give GoAccess more than one log files to process, so if you have for example the file access.log.1 around, you can use it as well:
goaccess \
    --log-format COMBINED \
    --output /tmp/report.html \
    /var/log/apache2/access.log \
    /var/log/apache2/access.log.1
If GoAccess succeeds (and it should), you're on the right track! All is left to do to complete this test is to have a look at the HTML report created. It's a single HTML page, so you can easily scp it to your machine, or just move it to the document root of your site, and then open it in your web browser. Looks good? So let's move on to more interesting things. Web server configuration This part is very short, because in terms of configuration of the web server, there's very little to do. As I said above, the only thing you want from the web server is to create access log files. Then you want to be sure that GoAccess and your web server agree on the format for these files. In the part above we used the combined log format, but GoAccess supports many other common log formats out of the box, and even allows you to parse custom log formats. For more details, refer to the option --log-format in the GoAccess manual page. Another common log format is named, well, common. It even has its own Wikipedia page. But compared to combined, the common log format contains less information, it doesn't include the referrer and user-agent values, meaning that you won't have it in the GoAccess report. So at this point you should understand that, unsurprisingly, GoAccess can only tell you about what's in the access logs, no more no less. And that's all in term of web server configuration. Configuration to run GoAccess unprivileged Now we're going to create a user and group for GoAccess, so that we don't have to run it as root. The reason is that, well, for everything running unattended on your server, the less code runs as root, the better. It's good practice and common sense. In this case, GoAccess is simply a log analyzer. So it just needs to read the logs files from your web server, and there is no need to be root for that, an unprivileged user can do the job just as well, assuming it has read permissions on /var/log/apache2 or /var/log/nginx. The log files of the web server are usually part of the adm group (though it might depend on your distro, I'm not sure). This is something you can check easily with the following command:
ls -l /var/log   grep -e apache2 -e nginx
As a result you should get something like that:
drwxr-x--- 2 root adm 20480 Jul 22 00:00 /var/log/apache2/
And as you can see, the directory apache2 belongs to the group adm. It means that you don't need to be root to read the logs, instead any unprivileged user that belongs to the group adm can do it. So, let's create the goaccess user, and add it to the adm group:
adduser --system --group --no-create-home goaccess
addgroup goaccess adm
And now, let's run GoAccess unprivileged, and verify that it can still read the log files:
setpriv \
    --reuid=goaccess --regid=goaccess \
    --init-groups --inh-caps=-all \
    -- \
    goaccess \
    --log-format COMBINED \
    --output /tmp/report2.html \
    /var/log/apache2/access.log
setpriv is the command used to drop privileges. The syntax is quite verbose, it's not super friendly for tutorials, but don't be scared and read the manual page to learn what it does. In any case, this command should work, and at this point, it means that you have a goaccess user ready, and we'll use it to run GoAccess unprivileged. Integration, option A - Run GoAccess once a day, from a logrotate hook In this part we wire things together, so that GoAccess processes the log files once a day, adds the new logs to its internal database, and generates a report from all that aggregated data. The result will be a single HTML page. Introducing logrotate In order to do that, we'll use a logrotate hook. logrotate is a little tool that should already be installed on your server, and that runs once a day, and that is in charge of rotating the log files. "Rotating the logs" means moving access.log to access.log.1 and so on. With logrotate, a new log file is created every day, and log files that are too old are deleted. That's what prevents your logs from filling up your disk basically :) You can check that logrotate is indeed installed and enabled with this command (assuming that your init system is systemd):
systemctl status logrotate.timer
What's interesting for us is that logrotate allows you to run scripts before and after the rotation is performed, so it's an ideal place from where to run GoAccess. In short, we want to run GoAccess just before the logs are rotated away, in the prerotate hook. But let's do things in order. At first, we need to write a little wrapper script that will be in charge of running GoAccess with the right arguments, and that will process all of your sites. The wrapper script This wrapper is made to process more than one site, but if you have only one site it works just as well, of course. So let me just drop it on you like that, and I'll explain afterward. Here's my wrapper script:
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#!/bin/bash
# Process log files /var/www/apache2/SITE/access.log,
# only if /var/lib/goaccess-db/SITE exists.
# Create HTML reports in $1, a directory that must exist.
set -eu
OUTDIR=
LOGDIR=/var/log/apache2
DBDIR=/var/lib/goaccess-db
fail()   echo >&2 "$@"; exit 1;  
[ $# -eq 1 ]   fail "Usage: $(basename $0) OUTPUT_DIRECTORY"
OUTDIR=$1
[ -d "$OUTDIR" ]   fail "'$OUTDIR' is not a directory"
[ -d "$LOGDIR" ]   fail "'$LOGDIR' is not a directory"
[ -d "$DBDIR"  ]   fail "'$DBDIR' is not a directory"
for d in $(find "$LOGDIR" -mindepth 1 -maxdepth 1 -type d); do
    site=$(basename "$sitedir")
    dbdir=$DBDIR/$site
    logfile=$d/access.log
    outfile=$OUTDIR/$site.html
    if [ ! -d "$dbdir" ]   [ ! -e "$logfile" ]; then
        echo "  Skipping site '$site'"
        continue
    else
        echo "  Processing site '$site'"
    fi
    setpriv \
        --reuid=goaccess --regid=goaccess \
        --init-groups --inh-caps=-all \
        -- \
    goaccess \
        --agent-list \
        --anonymize-ip \
        --persist \
        --restore \
        --config-file /etc/goaccess/goaccess.conf \
        --db-path "$dbdir" \
        --log-format "COMBINED" \
        --output "$outfile" \
        "$logfile"
done
So you'd install this script at /usr/local/bin/goaccess-wrapper for example, and make it executable:
chmod +x /usr/local/bin/goaccess-wrapper
A few things to note: As is, the script makes the assumption that the logs for your site are logged in a sub-directory /var/log/apache2/SITE/. If it's not the case, adjust that in the wrapper accordingly. The name of this sub-directory is then used to find the GoAccess database directory /var/lib/goaccess-db/SITE/. This directory is expected to exist, meaning that if you don't create it yourself, the wrapper won't process this particular site. It's a simple way to control which sites are processed by this GoAccess wrapper, and which sites are not. So if you want goaccess-wrapper to process the site SITE, just create a directory with the name of this site under /var/lib/goaccess-db:
mkdir -p /var/lib/goaccess-db/SITE
chown goaccess:goaccess /var/lib/goaccess-db/SITE
Now let's create an output directory:
mkdir /tmp/goaccess-reports
chown goaccess:goaccess /tmp/goaccess-reports
And let's give a try to the wrapper script:
goaccess-wrapper /tmp/goaccess-reports
ls /tmp/goaccess-reports
Which should give you:
SITE.html
At the same time, you can check that GoAccess populated the database with a bunch of files:
ls /var/lib/goaccess-db/SITE
Setting up the logrotate prerotate hook At this point, we have the wrapper in place. Let's now add a pre-rotate hook so that goaccess-wrapper runs once a day, just before the logs are rotated away. The logrotate config file for Apache2 is located at /etc/logrotate.d/apache2, and for NGINX it's at /etc/logrotate.d/nginx. Among the many things you'll see in this file, here's what is of interest for us: In the config file, there is also this snippet:
prerotate
    if [ -d /etc/logrotate.d/httpd-prerotate ]; then \
        run-parts /etc/logrotate.d/httpd-prerotate; \
    fi; \
endscript
It indicates that scripts in the directory /etc/logrotate.d/httpd-prerotate/ will be executed before the rotation takes place. Refer to the man page run-parts(8) for more details... Putting all of that together, it means that logs from the web server are rotated once a day, and if we want to run scripts just before the rotation, we can just drop them in the httpd-prerotate directory. Simple, right? Let's first create this directory if it doesn't exist:
mkdir -p /etc/logrotate.d/httpd-prerotate/
And let's create a tiny script at /etc/logrotate.d/httpd-prerotate/goaccess:
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#!/bin/sh
exec goaccess-wrapper /tmp/goaccess-reports
Don't forget to make it executable:
chmod +x /etc/logrotate.d/httpd-prerotate/goaccess
As you can see, the only thing that this script does is to invoke the wrapper with the right argument, ie. the output directory for the HTML reports that are generated. And that's all. Now you can just come back tomorrow, check the logs, and make sure that the hook was executed and succeeded. For example, this kind of command will tell you quickly if it worked:
journalctl   grep logrotate
Integration, option B - Run GoAccess once a day, from a systemd service OK so we've just seen how to use a logrotate hook. One downside with that is that we have to drop privileges in the wrapper script, because logrotate runs as root, and we don't want to run GoAccess as root. Hence the rather convoluted syntax with setpriv. Rather than embedding this kind of thing in a wrapper script, we can instead run the wrapper script from a [systemd][] service, and define which user runs the wrapper straight in the systemd service file. Introducing systemd niceties So we can create a systemd service, along with a systemd timer that fires daily. We can then set the user and group that execute the script straight in the systemd service, and there's no need for setpriv anymore. It's a bit more streamlined. We can even go a bit further, and use systemd parameterized units (also called templates), so that we have one service per site (instead of one service that process all of our sites). That will simplify the wrapper script a lot, and it also looks nicer in the logs. With this approach however, it seems that we can't really run exactly before the logs are rotated away, like we did in the section above. But that's OK. What we'll do is that we'll run once a day, no matter the time, and we'll just make sure to process both log files access.log and access.log.1 (ie. the current logs and the logs from yesterday). This way, we're sure not to miss any line from the logs. Note that GoAccess is smart enough to only consider newer entries from the log files, and discard entries that are already in the database. In other words, it's safe to parse the same log file more than once, GoAccess will do the right thing. For more details see "INCREMENTAL LOG PROCESSING" from man goaccess. systemd]: https://freedesktop.org/wiki/Software/systemd/ Implementation And here's how it all looks like. First, a little wrapper script for GoAccess:
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#!/bin/bash
# Usage: $0 SITE DBDIR LOGDIR OUTDIR
set -eu
SITE=$1
DBDIR=$2
LOGDIR=$3
OUTDIR=$4
LOGFILES=()
for ext in log log.1; do
    logfile="$LOGDIR/access.$ext"
    [ -e "$logfile" ] && LOGFILES+=("$logfile")
done
if [ $ #LOGFILES[@]  -eq 0 ]; then
    echo "No log files in '$LOGDIR'"
    exit 0
fi
goaccess \
    --agent-list \
    --anonymize-ip \
    --persist \
    --restore \
    --config-file /etc/goaccess/goaccess.conf \
    --db-path "$DBDIR" \
    --log-format "COMBINED" \
    --output "$OUTDIR/$SITE.html" \
    "$ LOGFILES[@] "
This wrapper does very little. Actually, the only thing it does is to check for the existence of the two log files access.log and access.log.1, to be sure that we don't ask GoAccess to process a file that does not exist (GoAccess would not be happy about that). Save this file under /usr/local/bin/goaccess-wrapper, don't forget to make it executable:
chmod +x /usr/local/bin/goaccess-wrapper
Then, create a systemd parameterized unit file, so that we can run this wrapper as a systemd service. Save it under /etc/systemd/system/goaccess@.service:
[Unit]
Description=Update GoAccess report - %i
ConditionPathIsDirectory=/var/lib/goaccess-db/%i
ConditionPathIsDirectory=/var/log/apache2/%i
ConditionPathIsDirectory=/tmp/goaccess-reports
PartOf=goaccess.service
[Service]
Type=oneshot
User=goaccess
Group=goaccess
Nice=19
ExecStart=/usr/local/bin/goaccess-wrapper \
 %i \
 /var/lib/goaccess-db/%i \
 /var/log/apache2/%i \
 /tmp/goaccess-reports
So, what is a systemd parameterized unit? It's a service to which you can pass an argument when you enable it. The %i in the unit definition will be replaced by this argument. In our case, the argument will be the name of the site that we want to process. As you can see, we use the directive ConditionPathIsDirectory= extensively, so that if ever one of the required directories does not exist, the unit will just be skipped (and marked as such in the logs). It's a graceful way to fail. We run the wrapper as the user and group goaccess, thanks to User= and Group=. We also use Nice= to give a low priority to the process. At this point, it's already possible to test. Just make sure that you created a directory for the GoAccess database:
mkdir -p /var/lib/goaccess-db/SITE
chown goaccess:goaccess /var/lib/goaccess-db/SITE
Also make sure that the output directory exists:
mkdir /tmp/goaccess-reports
chown goaccess:goaccess /tmp/goaccess-reports
Then reload systemd and fire the unit to see if it works:
systemctl daemon-reload
systemctl start goaccess@SITE.service
journalctl   tail
And that should work already. As you can see, the argument, SITE, is passed in the systemctl start command. We just append it after the @, in the name of the unit. Now, let's create another GoAccess service file, which sole purpose is to group all the parameterized units together, so that we can start them all in one go. Note that we don't use a systemd target for that, because ultimately we want to run it once a day, and that would not be possible with a target. So instead we use a dummy oneshot service. So here it is, saved under /etc/systemd/system/goaccess.service:
[Unit]
Description=Update GoAccess reports
Requires= \
 goaccess@SITE1.service \
 goaccess@SITE2.service
[Service]
Type=oneshot
ExecStart=true
As you can see, we simply list the sites that we want to process in the Requires= directive. In this example we have two sites named SITE1 and SITE2. Let's ensure that everything is still good:
systemctl daemon-reload
systemctl start goaccess.service
journalctl   tail
Check the logs, both sites SITE1 and SITE2 should have been processed. And finally, let's create a timer, so that systemd runs goaccess.service once a day. Save it under /etc/systemd/system/goaccess.timer.
[Unit]
Description=Daily update of GoAccess reports
[Timer]
OnCalendar=daily
RandomizedDelaySec=1h
Persistent=true
[Install]
WantedBy=timers.target
Finally, enable the timer:
systemctl daemon-reload
systemctl enable --now goaccess.timer
At this point, everything should be OK. Just come back tomorrow and check the logs with something like:
journalctl   grep goaccess
Last word: if you have only one site to process, of course you can simplify, for example you can hardcode all the paths in the file goaccess.service instead of using a parameterized unit. Up to you. Daily operations So in this part, we assume that you have GoAccess all setup and running, once a day or so. Let's just go over a few things worth noting. Serve your report Up to now in this tutorial, we created the reports in /tmp/goaccess-reports, but that was just for the sake of the example. You will probably want to save your reports in a directory that is served by your web server, so that, well, you can actually look at it in your web browser, that was the point, right? So how to do that is a bit out of scope here, and I guess that if you want to monitor your website, you already have a website, so you will have no trouble serving the GoAccess HTML report. However there's an important detail to be aware of: GoAccess shows all the IP addresses of your visitors in the report. As long as the report is private it's OK, but if ever you make your GoAccess report public, then you should definitely invoke GoAccess with the option --anonymize-ip. Keep an eye on the logs In this tutorial, the reports we create, along with the GoAccess databases, will grow bigger every day, forever. It also means that the GoAccess processing time will grow a bit each day. So maybe the first thing to do is to keep an eye on the logs, to see how long it takes to GoAccess to do its job every day. Also, maybe you'd like to keep an eye on the size of the GoAccess database with:
du -sh /var/lib/goaccess-db/SITE
If your site has few visitors, I suspect it won't be a problem though. You could also be a bit pro-active in preventing this problem in the future, and for example you could break the reports into, say, monthly reports. Meaning that every month, you would create a new database in a new directory, and also start a new HTML report. This way you'd have monthly reports, and you make sure to limit the GoAccess processing time, by limiting the database size to a month. This can be achieved very easily, by including something like YEAR-MONTH in the database directory, and in the HTML report. You can handle that automatically in the wrapper script, for example:
sfx=$(date +'%Y-%m')
mkdir -p $DBDIR/$sfx
goaccess \
    --db-path $DBDIR/$sfx \
    --output "$OUTDIR/$SITE-$sfx.html" \
    ...
You get the idea. Further notes Migration from older versions With the --persist option, GoAccess keeps all the information from the logs in a database, so that it can re-use it later. In prior versions, GoAccess used the Tokyo Cabinet key-value store for that. However starting from v1.4, GoAccess dropped this dependency and now uses its own database format. As a result, the previous database can't be used anymore, you will have to remove it and restart from zero. At the moment there is no way to convert the data from the old database to the new one. If you're interested, this is discussed upstream at [#1783][bug-1783]. Another thing that changed with this new version is the name for some of the command-line options. For example, --load-from-disk was dropped in favor of --restore, and --keep-db-files became --persist. So you'll have to look at the documentation a bit, and update your script(s) accordingly. Other ways to use GoAccess It's also possible to do it completely differently. You could keep GoAccess running, pretty much like a daemon, with the --real-time-html option, and have it process the logs continuously, rather than calling it on a regular basis. It's also possible to see the GoAccess report straight in the terminal, thanks to libncurses, rather than creating a HTML report. And much more, GoAccess is packed with features. Conclusion I hope that this tutorial helped some of you folks. Feel free to drop an e-mail for comments.

2 August 2020

Enrico Zini: Libreoffice presentation tips

Snap guides Dragging from the rulers does not always create snap guides. If it doesn't, click on the slide background, "Snap guides", "Insert snap guide". In my case, after the first snap guide was manually inserted, it was possible to drag new one from the rulers. Master slides How to edit a master slide Change styles in master slide Do not change properties of text by selecting placeholder text in the Master View. Instead, open the Styles and formatting sidebar, and edit the styles in there. This means the style changes are applied to pages in all layouts, not just the "Title, Content" layout that is the only one editable in the "Master View". How to duplicate a master slide There seems to be no feature implemented for this, but you can do it, if you insist: It's needed enough that someone made a wikihow: https://www.wikihow.com/Copy-a-LibreOffice-Impress-Master-Slide. How to change the master slide for a layout that is not "Title, Content" I could not find a way to do it, but read on for a workaround. I found an ask.libreoffice.org question that went unanswered. I asked on #libreoffice on IRC and got no answer:
Hello. I'm doing the layout for a presentation in impress, and I can edit all sorts of aspects of the master slide. It seems that I can only edit the "Title, Content" layout of the master slide, though. I'd like to edit, for example, the "Title only" layout so that the title appears in a different place than the top of the page. Is it possible to edit specific layouts in a master page? In the master slide editor it seems impossible to select a layout, for example. Alternatively I tried creating multiple master slides, but then if I want to create a master slide for a title page, there's no way to remove the outline box, or the title box.
My work around has been to create multiple master slides, one for each layout. For a title layout, I moved the outline box into a corner, and one has to remove it manually after create a new slide. There seems to be no way of changing the position of elements not found in the "Title, Content" layout, like "Subtitle". On the other hand, given that one's working with an entirely different master slide, one can abuse the outline box as a subtitle. Note that if you later decide to change a style element for all the slides, you'll need to go propagate the change to the "Styles and Formatting" menu of all master slides you're using.

31 July 2020

Chris Lamb: Free software activities in July 2020

Here is my monthly update covering what I have been doing in the free and open source software world during July 2020 (previous month): For Lintian, the static analysis tool for Debian packages:

Reproducible Builds One of the original promises of open source software is that distributed peer review and transparency of process results in enhanced end-user security. However, whilst anyone may inspect the source code of free and open source software for malicious flaws, almost all software today is distributed as pre-compiled binaries. This allows nefarious third-parties to compromise systems by injecting malicious code into ostensibly secure software during the various compilation and distribution processes. The motivation behind the Reproducible Builds effort is to ensure no flaws have been introduced during this compilation process by promising identical results are always generated from a given source, thus allowing multiple third-parties to come to a consensus on whether a build was compromised. The project is proud to be a member project of the Software Freedom Conservancy. Conservancy acts as a corporate umbrella allowing projects to operate as non-profit initiatives without managing their own corporate structure. If you like the work of the Conservancy or the Reproducible Builds project, please consider becoming an official supporter. This month, I:

diffoscope Elsewhere in our tooling, I made the following changes to diffoscope, including preparing and uploading versions 150, 151, 152, 153 & 154 to Debian:

Debian In Debian, I made the following uploads this month:

Debian LTS This month I have worked 18 hours on Debian Long Term Support (LTS) and 12 for the Extended LTS project. This included: You can find out more about the project via the following video:

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