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6 October 2021

Reproducible Builds: Reproducible Builds in September 2021

The goal behind reproducible builds is to ensure that no deliberate flaws have been introduced during compilation processes via promising or mandating that identical results are always generated from a given source. This allowing multiple third-parties to come to an agreement on whether a build was compromised or not by a system of distributed consensus. In these reports we outline the most important things that have been happening in the world of reproducible builds in the past month:
First mentioned in our March 2021 report, Martin Heinz published two blog posts on sigstore, a project that endeavours to offer software signing as a public good, [the] software-signing equivalent to Let s Encrypt . The two posts, the first entitled Sigstore: A Solution to Software Supply Chain Security outlines more about the project and justifies its existence:
Software signing is not a new problem, so there must be some solution already, right? Yes, but signing software and maintaining keys is very difficult especially for non-security folks and UX of existing tools such as PGP leave much to be desired. That s why we need something like sigstore - an easy to use software/toolset for signing software artifacts.
The second post (titled Signing Software The Easy Way with Sigstore and Cosign) goes into some technical details of getting started.
There was an interesting thread in the /r/Signal subreddit that started from the observation that Signal s apk doesn t match with the source code:
Some time ago I checked Signal s reproducibility and it failed. I asked others to test in case I did something wrong, but nobody made any reports. Since then I tried to test the Google Play Store version of the apk against one I compiled myself, and that doesn t match either.

BitcoinBinary.org was announced this month, which aims to be a repository of Reproducible Build Proofs for Bitcoin Projects :
Most users are not capable of building from source code themselves, but we can at least get them able enough to check signatures and shasums. When reputable people who can tell everyone they were able to reproduce the project s build, others at least have a secondary source of validation.

Distribution work Fr d ric Pierret announced a new testing service at beta.tests.reproducible-builds.org, showing actual rebuilds of binaries distributed by both the Debian and Qubes distributions. In Debian specifically, however, 51 reviews of Debian packages were added, 31 were updated and 31 were removed this month to our database of classified issues. As part of this, Chris Lamb refreshed a number of notes, including the build_path_in_record_file_generated_by_pybuild_flit_plugin issue. Elsewhere in Debian, Roland Clobus posted his Fourth status update about reproducible live-build ISO images in Jenkins to our mailing list, which mentions (amongst other things) that:
  • All major configurations are still built regularly using live-build and bullseye.
  • All major configurations are reproducible now; Jenkins is green.
    • I ve worked around the issue for the Cinnamon image.
    • The patch was accepted and released within a few hours.
  • My main focus for the last month was on the live-build tool itself.
Related to this, there was continuing discussion on how to embed/encode the build metadata for the Debian live images which were being worked on by Roland Clobus.
Ariadne Conill published another detailed blog post related to various security initiatives within the Alpine Linux distribution. After summarising some conventional security work being done (eg. with sudo and the release of OpenSSH version 3.0), Ariadne included another section on reproducible builds: The main blocker [was] determining what to do about storing the build metadata so that a build environment can be recreated precisely . Finally, Bernhard M. Wiedemann posted his monthly reproducible builds status report.

Community news On our website this month, Bernhard M. Wiedemann fixed some broken links [ ] and Holger Levsen made a number of changes to the Who is Involved? page [ ][ ][ ]. On our mailing list, Magnus Ihse Bursie started a thread with the subject Reproducible builds on Java, which begins as follows:
I m working for Oracle in the Build Group for OpenJDK which is primary responsible for creating a built artifact of the OpenJDK source code. [ ] For the last few years, we have worked on a low-effort, background-style project to make the build of OpenJDK itself building reproducible. We ve come far, but there are still issues I d like to address. [ ]

diffoscope diffoscope is our in-depth and content-aware diff utility. Not only can it locate and diagnose reproducibility issues, it can provide human-readable diffs from many kinds of binary formats. This month, Chris Lamb prepared and uploaded versions 183, 184 and 185 as well as performed significant triaging of merge requests and other issues in addition to making the following changes:
  • New features:
    • Support a newer format version of the R language s .rds files. [ ]
    • Update tests for OCaml 4.12. [ ]
    • Add a missing format_class import. [ ]
  • Bug fixes:
    • Don t call close_archive when garbage collecting Archive instances, unless open_archive definitely returned successfully. This prevents, for example, an AttributeError where PGPContainer s cleanup routines were rightfully assuming that its temporary directory had actually been created. [ ]
    • Fix (and test) the comparison of R language s .rdb files after refactoring temporary directory handling. [ ]
    • Ensure that RPM archives exists in the Debian package description, regardless of whether python3-rpm is installed or not at build time. [ ]
  • Codebase improvements:
    • Use our assert_diff routine in tests/comparators/test_rdata.py. [ ]
    • Move diffoscope.versions to diffoscope.tests.utils.versions. [ ]
    • Reformat a number of modules with Black. [ ][ ]
However, the following changes were also made:
  • Mattia Rizzolo:
    • Fix an autopkgtest caused by the androguard module not being in the (expected) python3-androguard Debian package. [ ]
    • Appease a shellcheck warning in debian/tests/control.sh. [ ]
    • Ignore a warning from h5py in our tests that doesn t concern us. [ ]
    • Drop a trailing .1 from the Standards-Version field as it s required. [ ]
  • Zbigniew J drzejewski-Szmek:
    • Stop using the deprecated distutils.spawn.find_executable utility. [ ][ ][ ][ ][ ]
    • Adjust an LLVM-related test for LLVM version 13. [ ]
    • Update invocations of llvm-objdump. [ ]
    • Adjust a test with a one-byte text file for file version 5.40. [ ]
And, finally, Benjamin Peterson added a --diff-context option to control unified diff context size [ ] and Jean-Romain Garnier fixed the Macho comparator for architectures other than x86-64 [ ].

Upstream patches The Reproducible Builds project detects, dissects and attempts to fix as many currently-unreproducible packages as possible. We endeavour to send all of our patches upstream where appropriate. This month, we wrote a large number of such patches, including:

Testing framework The Reproducible Builds project runs a testing framework at tests.reproducible-builds.org, to check packages and other artifacts for reproducibility. This month, the following changes were made:
  • Holger Levsen:
    • Drop my package rebuilder prototype as it s not useful anymore. [ ]
    • Schedule old packages in Debian bookworm. [ ]
    • Stop scheduling packages for Debian buster. [ ][ ]
    • Don t include PostgreSQL debug output in package lists. [ ]
    • Detect Python library mismatches during build in the node health check. [ ]
    • Update a note on updating the FreeBSD system. [ ]
  • Mattia Rizzolo:
    • Silence a warning from Git. [ ]
    • Update a setting to reflect that Debian bookworm is the new testing. [ ]
    • Upgrade the PostgreSQL database to version 13. [ ]
  • Roland Clobus (Debian live image generation):
    • Workaround non-reproducible config files in the libxml-sax-perl package. [ ]
    • Use the new DNS for the snapshot service. [ ]
  • Vagrant Cascadian:
    • Also note that the armhf architecture also systematically varies by the kernel. [ ]

Contributing If you are interested in contributing to the Reproducible Builds project, please visit our Contribute page on our website. However, you can get in touch with us via:

Dirk Eddelbuettel: littler 0.3.14: Updates

max-heap image The fifteenth release of littler as a CRAN package just landed, following in the now fifteen year history (!!) as a package started by Jeff in 2006, and joined by me a few weeks later. littler is the first command-line interface for R as it predates Rscript. It allows for piping as well for shebang scripting via #!, uses command-line arguments more consistently and still starts faster. It also always loaded the methods package which Rscript only started to do in recent years. littler lives on Linux and Unix, has its difficulties on macOS due to yet-another-braindeadedness there (who ever thought case-insensitive filesystems as a default were a good idea?) and simply does not exist on Windows (yet the build system could be extended see RInside for an existence proof, and volunteers are welcome!). See the FAQ vignette on how to add it to your PATH. A few examples are highlighted at the Github repo, as well as in the examples vignette. This release updates the helper scripts to download nighlies of RStudio Server and Desktop to their new naming scheme, adds a downloader for Quarto, extends the roxy.r wrapper with a new option, and updates the configure setting as requestion by CRAN and more. See the NEWS file entry below for more.

Changes in littler version 0.3.14 (2021-10-05)
  • Changes in examples
    • Updated RStudio download helper to changed file names
    • Added a new option to roxy.r wrapper
    • Added a downloader for Quarto command-line tool
  • Changes in package
    • The configure files were updated to the standard of autoconf version 2.69 following a CRAN request

My CRANberries provides a comparison to the previous release. Full details for the littler release are provided as usual at the ChangeLog page, and now also on the new package docs website. The code is available via the GitHub repo, from tarballs and now of course also from its CRAN page and via install.packages("littler"). Binary packages are available directly in Debian as well as soon via Ubuntu binaries at CRAN thanks to the tireless Michael Rutter. Comments and suggestions are welcome at the GitHub repo. If you like this or other open-source work I do, you can now sponsor me at GitHub.

This post by Dirk Eddelbuettel originated on his Thinking inside the box blog. Please report excessive re-aggregation in third-party for-profit settings.

2 October 2021

Jacob Adams: SSH Port Forwarding and the Command Cargo Cult

Someone is Wrong on the Internet If you look up how to only forward ports with ssh, you may come across solutions like this:
ssh -nNT -L 8000:example.com:80 user@bastion.example.com
Or perhaps this, if you also wanted to send ssh to the background:
ssh -NT -L 3306:db.example.com:3306 example.com &
Both of these use at least one option that is entirely redundant, and the second can cause ssh to fail to connect if you happen to be using password authentication. However, they seem to still persist in various articles about ssh port forwarding. I myself was using the first variation until just recently, and I figured I would write this up to inform others who might be still using these solutions. The correct option for this situation is not -nNT but simply -N, as in:
ssh -N -L 8000:example.com:80 user@bastion.example.com
If you want to also send ssh to the background, then you ll want to add -f instead of using your shell s built-in & feature, because you can then input passwords into ssh if necessary1 Honestly, that s the point of this article, so you can stop here if you want. If you re looking for a detailed explaination of what each of these options actually does, or if you have no idea what I m talking about, read on!

What is SSH Port Forwarding? ssh is a powerful tool for remote access to servers, allowing you to execute commands on a remote machine. It can also forward ports through a secure tunnel with the -L and -R options. Basically, you can forward a connection to a local port to a remote server like so:
ssh -L 8080:other.example.com:80 ssh.example.com
In this example, you connect to ssh.example.com and then ssh forwards any traffic on your local machine port 80802 to other.example.com port 80 via ssh.example.com. This is a really powerful feature, allowing you to jump3 inside your firewall with just an ssh server exposed to the world. It can work in reverse as well with the -R option, allowing connections on a remote host in to a server running on your local machine. For example, say you were running a website on your local machine on port 8080 but wanted it accessible on example.com port 804. You could use something like:
ssh -R 8080:example.com:80 example.com
The trouble with ssh port forwarding is that, absent any additional options, you also open a shell on the remote machine. If you re planning to both work on a remote machine and use it to forward some connection, this is fine, but if you just need to forward a port quickly and don t care about a shell at that moment, it can be annoying, especially since if the shell closes ssh will close the forwarding port as well. This is where the -N option comes in.

SSH just forwarding ports In the ssh manual page5, -N is explained like so:
Do not execute a remote command. This is useful for just forwarding ports.
This is all we need. It instructs ssh to run no commands on the remote server, just forward the ports specified in the -L or -R options. But people seem to think that there are a bunch of other necessary options, so what do those do?

SSH and stdin -n controls how ssh interacts with standard input, specifically telling it not to:
Redirects stdin from /dev/null (actually, prevents reading from stdin). This must be used when ssh is run in the background. A common trick is to use this to run X11 programs on a remote machine. For example, ssh -n shadows.cs.hut.fi emacs & will start an emacs on shadows.cs.hut.fi, and the X11 connection will be automatically for warded over an encrypted channel. The ssh program will be put in the background. (This does not work if ssh needs to ask for a password or passphrase; see also the -f option.)

SSH passwords and backgrounding -f sends ssh to background, freeing up the terminal in which you ran ssh to do other things.
Requests ssh to go to background just before command execution. This is useful if ssh is going to ask for passwords or passphrases, but the user wants it in the background. This implies -n. The recommended way to start X11 programs at a remote site is with something like ssh -f host xterm.
As indicated in the description of -n, this does the same thing as using the shell s & feature with -n, but allows you to put in any necessary passwords first.

SSH and pseudo-terminals -T is a little more complicated than the others and has a very short explanation:
Disable pseudo-terminal allocation.
It has a counterpart in -t, which is explained a little better:
Force pseudo-terminal allocation. This can be used to execute arbitrary screen-based programs on a remote machine, which can be very useful, e.g. when implementing menu services. Multiple -t options force tty allocation, even if ssh has no local tty.
As the description of -t indicates, ssh is allocating a pseudo-terminal on the remote machine, not the local one. However, I have confirmed6 that -N doesn t allocate a pseudo-terminal either, since it doesn t run any commands. Thus this option is entirely unnecessary.

What s a pseudo-terminal? This is a bit complicated, but basically it s an interface used in UNIX-like systems, like Linux or BSD, that pretends to be a terminal (thus pseudo-terminal). Programs like your shell, or any text-based menu system made in libraries like ncurses, expect to be connected to one (when used interactively at least). Basically it fakes as if the input it is given (over the network, in the case of ssh) was typed on a physical terminal device and do things like raise an interrupt (SIGINT) if Ctrl+C is pressed.

Why? I don t know why these incorrect uses of ssh got passed around as correct, but I suspect it s a form of cargo cult, where we use example commands others provide and don t question what they do. One stack overflow answer I read that provided these options seemed to think -T was disabling the local pseudo-terminal, which might go some way towards explaining why they thought it was necessary. I guess the moral of this story is to question everything and actually read the manual, instead of just googling it.
  1. Not that you SHOULD be using ssh with password authentication anyway, but people do.
  2. Only on your loopback address by default, so that you re not allowing random people on your network to use your tunnel.
  3. In fact, ssh even supports Jump Hosts, allowing you to automatically forward an ssh connection through another machine.
  4. I can t say I recommend a setup like this for anything serious, as you d need to ssh as root to forward ports less than 1024. SSH forwarding is not for permanent solutions, just short-lived connections to machines that would be otherwise inaccessible.
  5. Specifically, my source is the ssh(1) manual page in OpenSSH 8.4, shipped as 1:8.4p1-5 in Debian bullseye.
  6. I just forwarded ports with -N and then logged in to that same machine and looked at psuedo-terminal allocations via ps ux. No terminal is associated with ssh connections using just the -N option.

1 October 2021

Russell Coker: Getting Started With Kali

Kali is a Debian based distribution aimed at penetration testing. I haven t felt a need to use it in the past because Debian has packages for all the scanning tools I regularly use, and all the rest are free software that can be obtained separately. But I recently decided to try it. Here s the URL to get Kali [1]. For a VM you can get VMWare or VirtualBox images, I chose VMWare as it s the most popular image format and also a much smaller download (2.7G vs 4G). For unknown reasons the torrent for it didn t work (might be a problem with my torrent client). The download link for it was extremely slow in Australia, so I downloaded it to a system in Germany and then copied it from there. I don t want to use either VMWare or VirtualBox because I find KVM/Qemu sufficient to do everything I want and they are in the Main section of Debian, so I needed to convert the image files. Some of the documentation on converting image formats to use with QEMU/KVM says to use a program called kvm-img which doesn t seem to exist, I used qemu-img from the qemu-utils package in Debian/Bullseye. The man page qemu-img(1) doesn t list the types of output format supported by the -O option and the examples returned by a web search show using -O qcow2 . It turns out that the following command will convert the image to raw format which is the format I prefer. I use BTRFS for storing all my VM images and that does all the copy-on-write I need.
qemu-img convert Kali-Linux-2021.3-vmware-amd64.vmdk ../kali
After converting it the file was 500M smaller than the VMWare files (10.2 vs 10.7G). Probably the Kali distribution file could be reduced in size by converting it to raw and then back to VMWare format. The Kali VMWare image is compressed with 7zip which has a good compression ratio, I waited almost 90 minutes for zstd to compress it with -19 and the result was 12% larger than the 7zip file. VMWare apparently likes to use an emulated SCSI controller, I spent some time trying to get that going in KVM. Apparently recent versions of QEMU changed the way this works and therefore older web pages aren t helpful. Also allegedly the SCSI emulation is buggy and unreliable (but I didn t manage to get it going so can t be sure). It turns out that the VM is configured to work with the virtio interface, the initramfs.conf has the configuration option MODULES=most which makes it boot on all common configurations (good work by the initramfs-tools maintainers). The image works well with the Spice display interface, so it doesn t capture my mouse, the window for the VM works the same way as other windows on my desktop and doesn t capture the mouse cursor. I don t know if this level of Spice integration is in Debian now, last time I tested it didn t work that way. I also downloaded Metasploitable [2] which is a VM image designed to be full of security flaws for testing the tools that are in Kali. Again it worked nicely after converting from VMWare to raw format. One thing to note about Metasploitable is that you must not make it available on the public Internet. My home network has NAT for IPv4 but all systems get public IPv6 addresses. It s usually nice that those things just work on VMs but not for this. So I added an iptables command to block IPv6 to /etc/rc.local. Conclusion Installing VMs for both these distributions was quite easy. Most of my time was spent downloading from a slow server, trying to get SCSI emulation working, working out how to convert image files, and testing different compression options. The time spent doing stuff once I knew what to do was very small. Kali has zsh as the default shell, it s quite nice. I ve been happy with bash for decades, but I might end up trying zsh out on other machines.

29 September 2021

Ian Jackson: Rust for the Polyglot Programmer

Rust is definitely in the news. I'm definitely on the bandwagon. (To me it feels like I've been wanting something like Rust for many years.) There're a huge number of intro tutorials, and of course there's the Rust Book. A friend observed to me, though, that while there's a lot of "write your first simple Rust program" there's a dearth of material aimed at the programmer who already knows a dozen diverse languages, and is familiar with computer architecture, basic type theory, and so on. Or indeed, for the impatient and confident reader more generally. I thought I would have a go. Rust for the Polyglot Programmer is the result. Compared to much other information about Rust, Rust for the Polyglot Programmer is: After reading Rust for the Polyglot Programmer, you won't know everything you need to know to use Rust for any project, but should know where to find it. Thanks are due to Simon Tatham, Mark Wooding, Daniel Silverstone, and others, for encouragement, and helpful reviews including important corrections. Particular thanks to Mark Wooding for wrestling pandoc and LaTeX into producing a pretty good-looking PDF. Remaining errors are, of course, mine. Comments are welcome of course, via the Dreamwidth comments or Salsa issue or MR. (If you're making a contribution, please indicate your agreement with the Developer Certificate of Origin.)
edited 2021-09-29 16:58 UTC to fix Salsa link targe, and 17:01 and 17:21 to for minor grammar fixes


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27 September 2021

Russ Allbery: Review: The Problem with Work

Review: The Problem with Work, by Kathi Weeks
Publisher: Duke University Press
Copyright: 2011
ISBN: 0-8223-5112-9
Format: Kindle
Pages: 304
One of the assumptions baked deeply into US society (and many others) is that people are largely defined by the work they do, and that work is the primary focus of life. Even in Marxist analysis, which is otherwise critical of how work is economically organized, work itself reigns supreme. This has been part of the feminist critique of both capitalism and Marxism, namely that both devalue domestic labor that has traditionally been unpaid, but even that criticism is normally framed as expanding the definition of work to include more of human activity. A few exceptions aside, we shy away from fundamentally rethinking the centrality of work to human experience. The Problem with Work begins as a critical analysis of that centrality of work and a history of some less-well-known movements against it. But, more valuably for me, it becomes a discussion of the types and merits of utopian thinking, including why convincing other people is not the only purpose for making a political demand. The largest problem with this book will be obvious early on: the writing style ranges from unnecessarily complex to nearly unreadable. Here's an excerpt from the first chapter:
The lack of interest in representing the daily grind of work routines in various forms of popular culture is perhaps understandable, as is the tendency among cultural critics to focus on the animation and meaningfulness of commodities rather than the eclipse of laboring activity that Marx identifies as the source of their fetishization (Marx 1976, 164-65). The preference for a level of abstraction that tends not to register either the qualitative dimensions or the hierarchical relations of work can also account for its relative neglect in the field of mainstream economics. But the lack of attention to the lived experiences and political textures of work within political theory would seem to be another matter. Indeed, political theorists tend to be more interested in our lives as citizens and noncitizens, legal subjects and bearers of rights, consumers and spectators, religious devotees and family members, than in our daily lives as workers.
This is only a quarter of a paragraph, and the entire book is written like this. I don't mind the occasional use of longer words for their precise meanings ("qualitative," "hierarchical") and can tolerate the academic habit of inserting mostly unnecessary citations. I have less patience with the meandering and complex sentences, excessive hedge words ("perhaps," "seem to be," "tend to be"), unnecessarily indirect phrasing ("can also account for" instead of "explains"), or obscure terms that are unnecessary to the sentence (what is "animation of commodities"?). And please have mercy and throw a reader some paragraph breaks. The writing style means substantial unnecessary effort for the reader, which is why it took me six months to read this book. It stalled all of my non-work non-fiction reading and I'm not sure it was worth the effort. That's unfortunate, because there were several important ideas in here that were new to me. The first was the overview of the "wages for housework" movement, which I had not previously heard of. It started from the common feminist position that traditional "women's work" is undervalued and advocated taking the next logical step of giving it equality with paid work by making it paid work. This was not successful, obviously, although the increasing prevalence of day care and cleaning services has made it partly true within certain economic classes in an odd and more capitalist way. While I, like Weeks, am dubious this was the right remedy, the observation that household work is essential to support capitalist activity but is unmeasured by GDP and often uncompensated both economically and socially has only become more accurate since the 1970s. Weeks argues that the usefulness of this movement should not be judged by its lack of success in achieving its demands, which leads to the second interesting point: the role of utopian demands in reframing and expanding a discussion. I normally judge a political demand on its effectiveness at convincing others to grant that demand, by which standard many activist campaigns (such as wages for housework) are unsuccessful. Weeks points out that making a utopian demand changes the way the person making the demand perceives the world, and this can have value even if the demand will never be granted. For example, to demand wages for housework requires rethinking how work is defined, what activities are compensated by the economic system, how such wages would be paid, and the implications for domestic social structures, among other things. That, in turn, helps in questioning assumptions and understanding more about how existing society sustains itself. Similarly, even if a utopian demand is never granted by society at large, forcing it to be rebutted can produce the same movement in thinking in others. In order to rebut a demand, one has to take it seriously and mount a defense of the premises that would allow one to rebut it. That can open a path to discussing and questioning those premises, which can have long-term persuasive power apart from the specific utopian demand. It's a similar concept as the Overton Window, but with more nuance: the idea isn't solely to move the perceived range of accepted discussion, but to force society to examine its assumptions and premises well enough to defend them, or possibly discover they're harder to defend than one might have thought. Weeks applies this principle to universal basic income, as a utopian demand that questions the premise that work should be central to personal identity. I kept thinking of the Black Lives Matter movement and the demand to abolish the police, which (at least in popular discussion) is a more recent example than this book but follows many of the same principles. The demand itself is unlikely to be met, but to rebut it requires defending the existence and nature of the police. That in turn leads to questions about the effectiveness of policing, such as clearance rates (which are far lower than one might have assumed). Many more examples came to mind. I've had that experience of discovering problems with my assumptions I'd never considered when debating others, but had not previously linked it with the merits of making demands that may be politically infeasible. The book closes with an interesting discussion of the types of utopias, starting from the closed utopia in the style of Thomas More in which the author sets up an ideal society. Weeks points out that this sort of utopia tends to collapse with the first impossibility or inconsistency the reader notices. The next step is utopias that acknowledge their own limitations and problems, which are more engaging (she cites Le Guin's The Dispossessed). More conditional than that is the utopian manifesto, which only addresses part of society. The least comprehensive and the most open is the utopian demand, such as wages for housework or universal basic income, which asks for a specific piece of utopia while intentionally leaving unspecified the rest of the society that could achieve it. The demand leaves room to maneuver; one can discuss possible improvements to society that would approach that utopian goal without committing to a single approach. I wish this book were better-written and easier to read, since as it stands I can't recommend it. There were large sections that I read but didn't have the mental energy to fully decipher or retain, such as the extended discussion of Ernst Bloch and Friedrich Nietzsche in the context of utopias. But that way of thinking about utopian demands and their merits for both the people making them and for those rebutting them, even if they're not politically feasible, will stick with me. Rating: 5 out of 10

22 September 2021

Ian Jackson: Tricky compatibility issue - Rust's io::ErrorKind

This post is about some changes recently made to Rust's ErrorKind, which aims to categorise OS errors in a portable way. Audiences for this post Background and context Error handling principles Handling different errors differently is often important (although, sadly, often neglected). For example, if a program tries to read its default configuration file, and gets a "file not found" error, it can proceed with its default configuration, knowing that the user hasn't provided a specific config. If it gets some other error, it should probably complain and quit, printing the message from the error (and the filename). Otherwise, if the network fileserver is down (say), the program might erroneously run with the default configuration and do something entirely wrong. Rust's portability aims The Rust programming language tries to make it straightforward to write portable code. Portable error handling is always a bit tricky. One of Rust's facilities in this area is std::io::ErrorKind which is an enum which tries to categorise (and, sometimes, enumerate) OS errors. The idea is that a program can check the error kind, and handle the error accordingly. That these ErrorKinds are part of the Rust standard library means that to get this right, you don't need to delve down and get the actual underlying operating system error number, and write separate code for each platform you want to support. You can check whether the error is ErrorKind::NotFound (or whatever). Because ErrorKind is so important in many Rust APIs, some code which isn't really doing an OS call can still have to provide an ErrorKind. For this purpose, Rust provides a special category ErrorKind::Other, which doesn't correspond to any particular OS error. Rust's stability aims and approach Another thing Rust tries to do is keep existing code working. More specifically, Rust tries to:
  1. Avoid making changes which would contradict the previously-published documentation of Rust's language and features.
  2. Tell you if you accidentally rely on properties which are not part of the published documentation.
By and large, this has been very successful. It means that if you write code now, and it compiles and runs cleanly, it is quite likely that it will continue work properly in the future, even as the language and ecosystem evolves. This blog post is about a case where Rust failed to do (2), above, and, sadly, it turned out that several people had accidentally relied on something the Rust project definitely intended to change. Furthermore, it was something which needed to change. And the new (corrected) way of using the API is not so obvious. Rust enums, as relevant to io::ErrorKind (Very briefly:) When you have a value which is an io::ErrorKind, you can compare it with specific values:
    if error.kind() == ErrorKind::NotFound   ...
  
But in Rust it's more usual to write something like this (which you can read like a switch statement):
    match error.kind()  
      ErrorKind::NotFound => use_default_configuration(),
      _ => panic!("could not read config file  :  ", &file, &error),
     
  
Here _ means "anything else". Rust insists that match statements are exhaustive, meaning that each one covers all the possibilities. So if you left out the line with the _, it wouldn't compile. Rust enums can also be marked non_exhaustive, which is a declaration by the API designer that they plan to add more kinds. This has been done for ErrorKind, so the _ is mandatory, even if you write out all the possibilities that exist right now: this ensures that if new ErrorKinds appear, they won't stop your code compiling. Improving the error categorisation The set of error categories stabilised in Rust 1.0 was too small. It missed many important kinds of error. This makes writing error-handling code awkward. In any case, we expect to add new error categories occasionally. I set about trying to improve this by proposing new ErrorKinds. This obviously needed considerable community review, which is why it took about 9 months. The trouble with Other and tests Rust has to assign an ErrorKind to every OS error, even ones it doesn't really know about. Until recently, it mapped all errors it didn't understand to ErrorKind::Other - reusing the category for "not an OS error at all". Serious people who write serious code like to have serious tests. In particular, testing error conditions is really important. For example, you might want to test your program's handling of disk full, to make sure it didn't crash, or corrupt files. You would set up some contraption that would simulate a full disk. And then, in your tests, you might check that the error was correct. But until very recently (still now, in Stable Rust), there was no ErrorKind::StorageFull. You would get ErrorKind::Other. If you were diligent you would dig out the OS error code (and check for ENOSPC on Unix, corresponding Windows errors, etc.). But that's tiresome. The more obvious thing to do is to check that the kind is Other. Obvious but wrong. ErrorKind is non_exhaustive, implying that more error kinds will appears, and, naturally, these would more finely categorise previously-Other OS errors. Unfortunately, the documentation note
Errors that are Other now may move to a different or a new ErrorKind variant in the future.
was only added in May 2020. So the wrongness of the "obvious" approach was, itself, not very obvious. And even with that docs note, there was no compiler warning or anything. The unfortunate result is that there is a body of code out there in the world which might break any time an error that was previously Other becomes properly categorised. Furthermore, there was nothing stopping new people writing new obvious-but-wrong code. Chosen solution: Uncategorized The Rust developers wanted an engineered safeguard against the bug of assuming that a particular error shows up as Other. They chose the following solution: There is now a new ErrorKind::Uncategorized which is now used for all OS errors for which there isn't a more specific categorisation. The fallback translation of unknown errors was changed from Other to Uncategorised. This is de jure justified by the fact that this enum has always been marked non_exhaustive. But in practice because this bug wasn't previously detected, there is such code in the wild. That code now breaks (usually, in the form of failing test cases). Usually when Rust starts to detect a particular programming error, it is reported as a new warning, which doesn't break anything. But that's not possible here, because this is a behavioural change. The new ErrorKind::Uncategorized is marked unstable. This makes it impossible to write code on Stable Rust which insists that an error comes out as Uncategorized. So, one cannot now write code that will break when new ErrorKinds are added. That's the intended effect. The downside is that this does break old code, and, worse, it is not as clear as it should be what the fixed code looks like. Alternatives considered and rejected by the Rust developers Not adding more ErrorKinds This was not tenable. The existing set is already too small, and error categorisation is in any case expected to improve over time. Just adding ErrorKinds as had been done before This would mean occasionally breaking test cases (or, possibly, production code) when an error that was previously Other becomes categorised. The broken code would have been "obvious", but de jure wrong, just as it is now, So this option amounts to expecting this broken code to continue to be written and continuing to break it occasionally. Somehow using Rust's Edition system The Rust language has a system to allow language evolution, where code declares its Edition (2015, 2018, 2021). Code from multiple editions can be combined, so that the ecosystem can upgrade gradually. It's not clear how this could be used for ErrorKind, though. Errors have to be passed between code with different editions. If those different editions had different categorisations, the resulting programs would have incoherent and broken error handling. Also some of the schemes for making this change would mean that new ErrorKinds could only be stabilised about once every 3 years, which is far too slow. How to fix code broken by this change Most main-line error handling code already has a fallback case for unknown errors. Simply replacing any occurrence of Other with _ is right. How to fix thorough tests The tricky problem is tests. Typically, a thorough test case wants to check that the error is "precisely as expected" (as far as the test can tell). Now that unknown errors come out as an unstable Uncategorized variant that's not so easy. If the test is expecting an error that is currently not categorised, you want to write code that says "if the error is any of the recognised kinds, call it a test failure". What does "any of the recognised kinds" mean here ? It doesn't meany any of the kinds recognised by the version of the Rust stdlib that is actually in use. That set might get bigger. When the test is compiled and run later, perhaps years later, the error in this test case might indeed be categorised. What you actually mean is "the error must not be any of the kinds which existed when the test was written". IMO therefore the right solution for such a test case is to cut and paste the current list of stable ErrorKinds into your code. This will seem wrong at first glance, because the list in your code and in Rust can get out of step. But when they do get out of step you want your version, not the stdlib's. So freezing the list at a point in time is precisely right. You probably only want to maintain one copy of this list, so put it somewhere central in your codebase's test support machinery. Periodically, you can update the list deliberately - and fix any resulting test failures. Unfortunately this approach is not suggested by the documentation. In theory you could work all this out yourself from first principles, given even the situation prior to May 2020, but it seems unlikely that many people have done so. In particular, cutting and pasting the list of recognised errors would seem very unnatural. Conclusions This was not an easy problem to solve well. I think Rust has done a plausible job given the various constraints, and the result is technically good. It is a shame that this change to make the error handling stability more correct caused the most trouble for the most careful people who write the most thorough tests. I also think the docs could be improved.
edited shortly after posting, and again 2021-09-22 16:11 UTC, to fix HTML slips


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21 September 2021

Russell Coker: Links September 2021

Matthew Garrett wrote an interesting and insightful blog post about the license of software developed or co-developed by machine-learning systems [1]. One of his main points is that people in the FOSS community should aim for less copyright protection. The USENIX ATC 21/OSDI 21 Joint Keynote Address titled It s Time for Operating Systems to Rediscover Hardware has some inssightful points to make [2]. Timothy Roscoe makes some incendiaty points but backs them up with evidence. Is Linux really an OS? I recommend that everyone who s interested in OS design watch this lecture. Cory Doctorow wrote an interesting set of 6 articles about Disneyland, ride pricing, and crowd control [3]. He proposes some interesting ideas for reforming Disneyland. Benjamin Bratton wrote an insightful article about how philosophy failed in the pandemic [4]. He focuses on the Italian philosopher Giorgio Agamben who has a history of writing stupid articles that match Qanon talking points but with better language skills. Arstechnica has an interesting article about penetration testers extracting an encryption key from the bus used by the TPM on a laptop [5]. It s not a likely attack in the real world as most networks can be broken more easily by other methods. But it s still interesting to learn about how the technology works. The Portalist has an article about David Brin s Startide Rising series of novels and his thought s on the concept of Uplift (which he denies inventing) [6]. Jacobin has an insightful article titled You re Not Lazy But Your Boss Wants You to Think You Are [7]. Making people identify as lazy is bad for them and bad for getting them to do work. But this is the first time I ve seen it described as a facet of abusive capitalism. Jacobin has an insightful article about free public transport [8]. Apparently there are already many regions that have free public transport (Tallinn the Capital of Estonia being one example). Fare free public transport allows bus drivers to concentrate on driving not taking fares, removes the need for ticket inspectors, and generally provides a better service. It allows passengers to board buses and trams faster thus reducing traffic congestion and encourages more people to use public transport instead of driving and reduces road maintenance costs. Interesting research from Israel about bypassing facial ID [9]. Apparently they can make a set of 9 images that can pass for over 40% of the population. I didn t expect facial recognition to be an effective form of authentication, but I didn t expect it to be that bad. Edward Snowden wrote an insightful blog post about types of conspiracies [10]. Kevin Rudd wrote an informative article about Sky News in Australia [11]. We need to have a Royal Commission now before we have our own 6th Jan event. Steve from Big Mess O Wires wrote an informative blog post about USB-C and 4K 60Hz video [12]. Basically you can t have a single USB-C hub do 4K 60Hz video and be a USB 3.x hub unless you have compression software running on your PC (slow and only works on Windows), or have DisplayPort 1.4 or Thunderbolt (both not well supported). All of the options are not well documented on online store pages so lots of people will get unpleasant surprises when their deliveries arrive. Computers suck. Steinar H. Gunderson wrote an informative blog post about GaN technology for smaller power supplies [13]. A 65W USB-C PSU that fits the usual wall wart form factor is an interesting development.

17 September 2021

Dirk Eddelbuettel: tidyCpp 0.0.5 on CRAN: More Protect ion

Another small release of the tidyCpp package arrived on CRAN overnight. The packages offers a clean C++ layer (as well as one small C++ helper class) on top of the C API for R which aims to make use of this robust (if awkward) C API a little easier and more consistent. See the vignette for motivating examples. The Protect class now uses the default methods for copy and move constructors and assignment allowing for wide use of the class. The small NumVec class now uses it for its data member. The NEWS entry (which I failed to update for the releases) follows.

Changes in tidyCpp version 0.0.5 (2021-09-16)
  • The Protect class uses default copy and move assignments and constructors
  • The data object in NumVec is now a Protect object

Thanks to my CRANberries, there is also a diffstat report for this release. For questions, suggestions, or issues please use the issue tracker at the GitHub repo. If you like this or other open-source work I do, you can now sponsor me at GitHub.

This post by Dirk Eddelbuettel originated on his Thinking inside the box blog. Please report excessive re-aggregation in third-party for-profit settings.

16 September 2021

Chris Lamb: On Colson Whitehead's Harlem Shuffle

Colson Whitehead's latest novel, Harlem Shuffle, was always going to be widely reviewed, if only because his last two books won Pulitzer prizes. Still, after enjoying both The Underground Railroad and The Nickel Boys, I was certainly going to read his next book, regardless of what the critics were saying indeed, it was actually quite agreeable to float above the manufactured energy of the book's launch. Saying that, I was encouraged to listen to an interview with the author by Ezra Klein. Now I had heard Whitehead speak once before when he accepted the Orwell Prize in 2020, and once again he came across as a pretty down-to-earth guy. Or if I were to emulate the detached and cynical tone Whitehead embodied in The Nickel Boys, after winning so many literary prizes in the past few years, he has clearly rehearsed how to respond to the cliched questions authors must be asked in every interview. With the obligatory throat-clearing of 'so, how did you get into writing?', for instance, Whitehead replies with his part of the catechism that 'It seemed like being a writer could be a cool job. You could work from home and not talk to people.' The response is the right combination of cute and self-effacing... and with its slight tone-deafness towards enforced isolation, it was no doubt honed before Covid-19. Harlem Shuffle tells three separate stories about Ray Carney, a furniture salesman and 'fence' for stolen goods in New York in the 1960s. Carney doesn't consider himself a genuine criminal though, and there's a certain logic to his relativistic morality. After all, everyone in New York City is on the take in some way, and if some 'lightly used items' in Carney's shop happened to have had 'previous owners', well, that's not quite his problem. 'Nothing solid in the city but the bedrock,' as one character dryly observes. Yet as Ezra pounces on in his NYT interview mentioned abov, the focus on the Harlem underworld means there are very few women in the book, and Whitehead's circular response ah well, it's a book about the criminals at that time! was a little unsatisfying. Not only did it feel uncharacteristically slippery of someone justly lauded for his unflinching power of observation (after all, it was the author who decided what to write about in the first place), it foreclosed on the opportunity to delve into why the heist and caper genres (from The Killing, The Feather Thief, Ocean's 11, etc.) have historically been a 'male' mode of storytelling. Perhaps knowing this to be the case, the conversation quickly steered towards Ray Carney's wife, Elizabeth, the only woman in the book who could be said possesses some plausible interiority. The following off-hand remark from Whitehead caught my attention:
My wife is convinced that [Elizabeth] knows everything about Carney's criminal life, and is sort of giving him a pass. And I'm not sure if that's true. I have to have to figure out exactly what she knows and when she knows it and how she feels about it.
I was quite taken by this, although not simply due to its effect on the story it self. As in, it immediately conjured up a charming picture of Whitehead's domestic arrangements: not only does Whitehead's wife feel free to disagree with what one of Whitehead's 'own' characters knows or believes, but that Colson has no problem whatsoever sharing that disagreement with the public at large. (It feels somehow natural that Whitehead's wife believes her counterpart knows more than she lets on, whilst Whitehead himself imbues the protagonist's wife with a kind of neo-Victorian innocence.) I'm minded to agree with Whitehead's partner myself, if only due to the passages where Elizabeth is studiously ignoring Carney's otherwise unexplained freak-outs. But all of these meta-thoughts simply underline just how emancipatory the Death of the Author can be. This product of academic literary criticism (the term was coined by Roland Barthes' 1967 essay of the same name) holds that the original author's intentions, ideas or biographical background carry no especial weight in determining how others should interpret their work. It is usually understood as meaning that a writer's own views are no more valid or 'correct' than the views held by someone else. (As an aside, I've found that most readers who encounter this concept for the first time have been reading books in this way since they were young. But the opposite is invariably true with cinephiles, who often have a bizarre obsession with researching or deciphering the 'true' interpretation of a film.) And with all that in mind, can you think of a more wry example of how freeing (and fun) nature of the Death of the Author than an author's own partner dissenting with their (Pulitzer Prize-winning) husband on the position of a lynchpin character?
The 1964 Harlem riot began after James Powell, a 15-year-old African American, was shot and killed by Thomas Gilligan, an NYPD police officer in front of 10s of witnesses. Gilligan was subsequently cleared by a grand jury.
As it turns out, the reviews for Harlem Shuffle have been almost universally positive, and after reading it in the two days after its release, I would certainly agree it is an above-average book. But it didn't quite take hold of me in the way that The Underground Railroad or The Nickel Boys did, especially the later chapters of The Nickel Boys that were set in contemporary New York and could thus make some (admittedly fairly explicit) connections from the 1960s to the present day that kind of connection is not there in Harlem Shuffle, or at least I did not pick up on it during my reading. I can see why one might take exception to that, though. For instance, it is certainly true that the week-long Harlem Riot forms a significant part of the plot, and some events in particular are entirely contingent on the ramifications of this momentous event. But it's difficult to argue the riot's impact are truly integral to the story, so not only is this uprising against police brutality almost regarded as a background event, any contemporary allusion to the murder of George Floyd is subsequently watered down. It's nowhere near the historical rubbernecking of Forrest Gump (1994), of course, but that's not a battle you should ever be fighting. Indeed, whilst a certain smoothness of affect is to be priced into the Whitehead reading experience, my initial overall reaction to Harlem Shuffle was fairly flat, despite all the action and intrigue on the page. The book perhaps belies its origins as a work conceived during quarantine after all, the book is essentially comprised of three loosely connected novellas, almost as if the unreality and mental turbulence of lockdown prevented the author from performing the psychological 'deep work' of producing a novel-length text with his usual depth of craft. A few other elements chimed with this being a 'lockdown novel' as well, particularly the book's preoccupation with the sheer physicality of the city compared to the usual complex interplay between its architecture and its inhabitants. This felt like it had been directly absorbed into the book from the author walking around his deserted city, and thus being able to take in details for the first time:
The doorways were entrances into different cities no, different entrances into one vast, secret city. Ever close, adjacent to all you know, just underneath. If you know where to look.
And I can't fail to mention that you can almost touch Whitehead's sublimated hunger to eat out again as well:
Stickups were chops they cook fast and hot, you re in and out. A stakeout was ribs fire down low, slow, taking your time. [ ] Sometimes when Carney jumped into the Hudson when he was a kid, some of that stuff got into his mouth. The Big Apple Diner served it up and called it coffee.
More seriously, however, the relatively thin personalities of minor characters then reminded me of the simulacrum of Zoom-based relationships, and the essentially unsatisfactory endings to the novellas felt reminiscent of lockdown pseudo-events that simply fizzle out without a bang. One of the stories ties up loose ends with: 'These things were usually enough to terminate a mob war, and they appeared to end the hostilities in this case as well.' They did? Well, okay, I guess.
The corner of 125th Street and Morningside Avenue in 2019, the purported location of Carney's fictional furniture store. Signage plays a prominent role in Harlem Shuffle, possibly due to the author's quarantine walks.
Still, it would be unfair to characterise myself as 'disappointed' with the novel, and none of this piece should be taken as really deep criticism. The book certainly was entertaining enough, and pretty funny in places as well:
Carney didn t have an etiquette book in front of him, but he was sure it was bad manners to sit on a man s safe. [ ] The manager of the laundromat was a scrawny man in a saggy undershirt painted with sweat stains. Launderer, heal thyself.
Yet I can't shake the feeling that every book you write is a book that you don't, and so we might need to hold out a little longer for Whitehead's 'George Floyd novel'. (Although it is for others to say how much of this sentiment is the expectations of a White Reader for The Black Author to ventriloquise the pain of 'their' community.) Some room for personal critique is surely permitted. I dearly missed the junk food energy of the dry and acerbic observations that run through Whitehead's previous work. At one point he had a good line on the model tokenisation that lurks behind 'The First Negro to...' labels, but the callbacks to this idea ceased without any payoff. Similar things happened with the not-so-subtle critiques of the American Dream:
Entrepreneur? Pepper said the last part like manure. That s just a hustler who pays taxes. [ ] One thing I ve learned in my job is that life is cheap, and when things start getting expensive, it gets cheaper still.
Ultimately, though, I think I just wanted more. I wanted a deeper exploration of how the real power in New York is not wielded by individual street hoodlums or even the cops but in the form of real estate, essentially serving as a synecdoche for Capital as a whole. (A recent take of this can be felt in Jed Rothstein's 2021 documentary, WeWork: Or the Making and Breaking of a $47 Billion Unicorn and it is perhaps pertinent to remember that the US President at the time this novel was written was affecting to be a real estate tycoon.). Indeed, just like the concluding scenes of J. J. Connolly's Layer Cake, although you can certainly pull off a cool heist against the Man, power ultimately resides in those who control the means of production... and a homespun furniture salesman on the corner of 125 & Morningside just ain't that. There are some nods to kind of analysis in the conclusion of the final story ('Their heist unwound as if it had never happened, and Van Wyck kept throwing up buildings.'), but, again, I would have simply liked more. And when I attempted then file this book away into the broader media landscape, given the current cultural visibility of 1960s pop culture (e.g. One Night in Miami (2020), Judas and the Black Messiah (2021), Summer of Soul (2021), etc.), Harlem Shuffle also seemed like a missed opportunity to critically analyse our (highly-qualified) longing for the civil rights era. I can certainly understand why we might look fondly on the cultural products from a period when politics was less alienated, when society was less atomised, and when it was still possible to imagine meaningful change, but in this dimension at least, Harlem Shuffle seems to merely contribute to this nostalgic escapism.

14 September 2021

Joachim Breitner: A Candid explainer: Quirks

This is the fifth and final post in a series about the interface description language Candid. If you made it this far, you now have a good understanding of what Candid is, what it is for and how it is used. For this final post, I ll put the spotlight on specific aspects of Candid that are maybe surprising, or odd, or quirky. This section will be quite opinionated, and could maybe be called what I d do differently if I d re-do the whole thing . Note that these quirks are not serious problems, and they don t invalidate the overall design. I am writing this up not to discourage the use of Candid, but merely help interested parties to understand it better.

References in the wire format When the work on Candid began at DFINITY, the Internet Computer was still far away from being a thing, and many fundamental aspects about it were still in the air. I particular, there was still talk about embracing capabilities as a core feature of the application model, which would be implemented as opaque references on the system level, likely building on WebAssembly s host reference type proposal (which only landed recently), and could be used to model access permissions, custom tokens and many other things. So Candid is designed with that in mind, and you ll find that its wire format is not just a type table and a value table, but actually
a triple (T, M, R), where T ( type ) and M ( memory ) are sequences of bytes and R ( references ) is a sequence of references.
Also the wire format for values of function service tyeps have an extra byte to distinguish between public references (represented by a principal and possible a method name in the data part), and these opaque references. Alas, references never made it into the Internet Computer, so all Candid implementations simply ignore that part of the specification. But it s still in the spec, and if it confused you before, now you know why.

Hashed field names Candid record and variant types look like they have textual field names:
type T = record   syndactyle : nat; trustbuster: bool  
But that is actually only true superficially. The wire format for Candid only stores hashes of field names. So the above is actually equivalent to
type T = record   4260381820 : nat; 3504418361 : bool  
or, for that matter, to
type T = record   destroys : bool; rectum : nat  
(Yes, I used an english word list to find these hash collisions. There aren t that many actually.) The benefit of such hashing is that the messages are a bit smaller in most (not all) cases, but it is a big annoyance for dynamic uses of Candid. It s the reason why tools like dfx, if they don t know the Candid interface of a service, will print the result with just the numerical hash, letting you guess which field is which. It also complicates host languages that derive Candid types from the host language, like Motoko, as some records (e.g. record trustbuster: bool; destroys : int ) with field name hash collisions can not be represented in Candid, and either the host language s type system needs to be Candid aware now (as is the case of Motoko), or serialization/deserialization will fail at runtime, or odd bugs can happen. (More discussion of this issue).

Tuples Many languages have a built-in notion of a tuple type (e.g. (Int, Bool)), but Candid does not have such a type. The only first class product type is records. This means that tuples have to encoded as records somehow. Conveniently(?) record fields are just numbers after all, so the type (Int, Bool) would be mapped to the type
record   0 : int; 1 : bool  
So tuples can be expressed. But from my experience implementing the type mappings for Motoko and Haskell this is causing headaches. To get a good experience when importing from Candid, the tools have to try to reconstruct which records may have been tuples originally, and turn them into tuples. The main argument for the status quo is that Candid types should be canonical, and there should not be more than one product type, and records are fine, and there needs to be no anonymous product type. But that has never quite resonated with me, given the practical reality of tuple types in many host languages.

Argument sequences Did I say that Candid does not have tuple types? Turns out it does, sort of. There is no first class anonymous product, but since functions take sequences of arguments and results, there is a tuple type right there:
func foo : (bool, int) -> (int, bool)
Again, I found that ergonomic interaction with host languages becomes relatively unwieldy by requiring functions to take and return sequences of values. This is especially true for languages where functions take one argument value or return one result type (the latter being very common). Here, return sequences of length one are turned into that type directly, longer argument sequences turn into the host language s tuple type, and nullary argument sequences turn into the idiomatic unit type. But this means that the types (int, bool) -> () and (record 0: int, 1: bool ) -> () may be mapped to the same host language type, which causes problems when you hope to encode all necessary Candid type information in the host language. Another oddity with argument and result sequences is that you can give names to the entries, e.g. write
func hello : (last_name : text; first_name : text) -> ()
but these names are completely ignored! So while this looks like you can, for example, add new optional arguments in the middle, such as
func hello : (last_name : text; middle_name: opt text, first_name : text) -> ()
without breaking clients, this does not have the effect you think it has and will likely break. My suggestion is to never put names on function arguments and result values in Candid interfaces, and for anything that might be extended with new fields or where you want to name the arguments, use a single record type as the only argument:
func hello : (record   last_name : text; first_name : text ) -> ()
This allows you to add and remove arguments more easily and reliably.

Type shorthands The Candid specification defines a system of types, and then adds a number of syntactic short-hands . For example, if you write blob in a Candid type description, it ought to means the same as vec nat8. My qualm with that is that it doesn t always mean the same. A Candid type description is interpreted by a number of, say, consumers . Two such consumers are part of the Candid specification:
  • The specification that defines the wire format for that type
  • The upgrading (subtyping) rules
But there are more! For every host language, there is some mapping from Candid types to host language types, and also generic tools like Candid UI are consumers of the type algebra. If these were to take the Candid specification as gospel, they would be forced to treat blob and vec nat8 the same, but that would be quite unergonomic and might cause performance regressions (most language try to map blob to some compact binary data type, while vec t tends to turn into some form of array structure). So they need to be pragmatic and treat blob and vec nat8 differently. But then, for all practical purposes, blob is not just a short-hand of vec nat8. They are different types that just happens to have the same wire representations and subtyping relations. This affects not just blob, but also tuples (record blob; int; bool ) and field names , as discussed above.

The value text format For a while after defining Candid, the only implementation was in Motoko, and all the plumbing was automatic, so there was never a need for users to to explicitly handle Candid values, as all values were Motoko values. Still, for debugging and testing and such things, we eventually needed a way to print out Candid values, so the text format was defined ( To enable convenient debugging, the following grammar specifies a text format for values ). But soon the dfx tool learned to talk to canisters, and now users needed to enter Candid value on the command line, possibly even when talking to canisters for which the interface was not known to dfx. And, sure enough, the textual interface defined in the Candid spec was used. Unfortunately, since it was not designed for that use case, it is rather unwieldy:
  • It is quite verbose. You have to write record , not just . Vectors are written vec ; instead of some conventional syntax like [ , ]. Variants are written as variant error = " " with braces that don t any value here, and something like #error " " might have worked as well. With a bit more care, a more concise and ergonomic syntax might have been possible.
  • It wasn t designed to be sufficient to create a Candid value from it. If you write 5 it s unclear whether that s a nat or an int16 or what (and all of these have different wire representations). Type annotations were later added, but are relatively unwieldy, and don t cover all cases (e.g. a service reference with a recursive type cannot be represented in the textual format at the moment).
  • Not really the fault of the textual format, but some useful information about the types is not reflected in the type description that s part of the wire format. In particular not the field names, and whether a value was intended to be binary data (blob) or a list of small numbers (vec nat8), so pretty-printing such values requires guesswork. The Haskell library even tries to brute-force the hash to guess the field name, if it is short or in a english word list!
In hindsight I think it was too optimistic to assume that correct static type information is always available, and instead of actively trying to discourage dynamic use, Candid might be better if we had taken these (unavoidable?) use cases into account.

Custom wire format At the beginning of this post, I have a Candid is list. The list is relatively long, and the actual wire format is just one bullet point. Yes, defining a wire format that works isn t rocket science, and it was easiest to just make one up. But since most of the interesting meat of Candid is in other aspects (subtyping rules, host language integration), I wonder if it would have been better to use an existing, generic wire format, such as CBOR, and build Candid as a layer on top. This would give us plenty of tools and libraries to begin with. And maybe it would have reduced barrier of entry for developers, which now led to the very strange situation that DFINITY advocates for the universal use of Candid on the Internet Computer, so that all services can smoothly interact, but two of the most important services on the Internet Computer (the registry and the ledger) use Protobuf as their primary interface format, with Candid interfaces missing or an afterthought.

Sideways Interface Evolution This is not a quirk of Candid itself, but rather an idiom of how you can use Candid that emerged from our solution for record extensions and upgrades. Consider our example from before, a service with interface
service   add_user : (record   login : text; name : text  ) -> ()  
where you want to add an age field, which should be a number. The official way of doing that is to add that field with an optional type:
service   add_user : (record   login : text; name : text; age : opt nat  ) -> ()  
As explained above, this will not break old clients, as the decoder will treat a missing argument as null. So far so good. But often when adding such a field you don t want to bother new clients with the fact that this age was, at some point in the past, not there yet. And you can do that! The trick is to distinguish between the interface you publish and the interface you implement. You can (for example in your documentation) state that the interface is
service   add_user : (record   login : text; name : text; age : nat  ) -> ()  
which is not a subtype of the old type, but it is the interface you want new clients to work with. And then your implementation uses the type with opt nat. Calls from old clients will come through as null, and calls from new clients will come through as opt 42. We can see this idiom used in the Management Canister of the Internet Computer. The current documented interface only mentions a controllers : vec principal field in the settings, but the implementation still can handle both the old controller : principal and the new controllers field. It s probably advisable to let your CI system check that new versions of your service continue to implement all published interfaces, including past interfaces. But as long as the actual implementation s interface is a subtype of all interfaces ever published, this works fine. This pattern is related to when your service implements, say, http_request (so its implemented interface is a subtype of that common interface), but does not include that method in the published documentation (because clients of your service don t need to call it).

Self-describing Services As you have noticed, Candid was very much designed assuming that all parties always have the service type of services they want to interact with. But the Candid specification does not define how one can obtain the interface of a given service, and there isn t really a an official way to do that on the Internet Computer. That is unfortunate, because many interesting features depend on that: Such as writing import C "ic:7e6iv-biaaa-aaaaf-aaada-cai" in your Motoko program, and having it s type right there. Or tools like ic.rocks, that allow you to interact with any canister right there. One reason why we don t really have that feature yet is because of disagreements about how dynamic that feature should be. Should you be able to just ask the canister for its interface (and allow the canister to vary the response, for example if it can change its functionality over time, even without changing the actual wasm code)? Or is the interface a static property of the code, and one should be able to query the system for that data, without the canister s active involvement. Or, completely different, should interfaces be distributed out of band, maybe together with API documentation, or in some canister registry somewhere else? I always leaned towards the first of these options, but not convincingly enough. The second options requires system assistance, so more components to change, more teams to be involved that maybe intrinsically don t care a lot about this feature. And the third might have emerged as the community matures and builds such infrastructure, but that did not happen yet. In the end I sneaked in an implementation of the first into Motoko, arguing that even if we don t know yet how this feature will be implemented eventually, we all want the feature to exist somehow, and we really really want to unblock all the interesting applications it enables (e.g. Candid UI). That s why every Motoko canister, and some rust canisters too, implements a method
__get_candid_interface_tmp_hack : () -> (text)
that one can use to get the Candid interface file. The name was chosen to signal that this may not be the final interface, but like all good provisional solutions, it may last longer than intended. If that s the case, I m not sorry. This concludes my blog post series about Candid, for now. If you want to know more, feel free to post your question on the DFINTY developer forum, and I ll probably answer.

Jonathan Dowland: GHC rewrite rules

The Glasgow Haskell Compiler (GHC) has support for user-supplied rewrite rules, which applied during one of the compiler optimisation stages. An example rule is
 -# RULES
      "streamFilter fuse" forall f g xs.
          streamFilter f (streamFilter g xs) = streamFilter (f.g) xs
  #- 
I spent some time today looking at these more closely. In order for rewrite rules to be applied, optimisation needs to be enabled. This conflicts with interactive use of GHC, so you can't explore these things in GHCi. I think rewrite rules are enabled by default (with optimisation), but you can ask for them explicitly. When investigating these it's also useful to ask ghc to always recompile, otherwise you have to change the source or manually remove .hi or .o files (etc.) between invocations. A starting set of command-line options to use then, are
-O -fenable-rewrite-rules -fforce-recomp
GHC runs several compilation stages, and the source program is transformed into several different languages or language dialects as it goes. Before the phase where rewrite rules are applied, some other optimisations take place, and the source gets desugared. You can see the results of the desugaring by passing the argument -ddump-ds. Here's an example program
main = print (unStream (streamFilter (>3) (streamFilter (<10)
    (mkStream [0..20]))))
And here's what it looks like after the first pass optimisation and desugaring:
main
  = print
      ($fShow[] $fShowInteger)
      (unStream
         (streamFilter
            (let  
               ds
               ds = 3   in
             \ ds -> > $fOrdInteger ds ds)
            (streamFilter
               (let  
                  ds
                  ds = 10   in
                \ ds -> < $fOrdInteger ds ds)
               (mkStream (enumFromTo $fEnumInteger 0 20)))))
(Note: I used -dsuppress-all and -dsuppress-uniques to improve the clarity of the above output. See Suppressing unwanted information for further details). Those short-hand sections ((<3)) in the input program are expanded to something quite a lot longer. Out of curiosity I tried it again with plain lambdas, not sections, and the result was smaller
main
  = print
      ($fShow[] $fShowInteger)
      (unStream
         (streamFilter
            (\ x -> > $fOrdInteger x 3)
            (streamFilter
               (\ x -> < $fOrdInteger x 10)
               (mkStream (enumFromTo $fEnumInteger 0 20)))))
Rewrite rules happen after this. Once they're done (and several other passes), the program is translated into an intermediate representation called Tiny Core. This language faintly resembles the input Haskell. GHC will output the Tiny Core program if you supply the argument -ddump-simpl. Here's (most) of the program in Tiny Core (I've substituted some constants for clarity):
main  = hPutStr' stdout main1 True
main1 = $fShowInteger_$cshowList (catMaybes1 (main_go 0)) []
main_go
  = \ x ->
      case gtInteger# x 20 of  
        DEFAULT ->
          case ltInteger# x 10 of  
            DEFAULT -> main_go (plusInteger x 1);
            1# ->
              case gtInteger# x 3 of  
                DEFAULT -> main_go (plusInteger x 1);
                1# -> : (Just x) (main_go (plusInteger x 1))
               
           ;
        1# -> []
       
After Tiny Core, GHC continues to translate the program into other forms (including STG, CMM, ASM) and you can ask GHC to dump those representations too, but this is all downstream from the rewrites so not relevant to them. The rewrite rule at the top of this blog post is never applied: It doesn't get a chance, because the function it operates on (streamFilter) is inlined by GHC. GHC can detect this in some circumstances (-Winline-rule-shadowing). You instruct GHC to report on which rules fired with -ddump-rule-firings and can see before-and-after snippets of Tiny Core for each rule applied with -ddump-rule-rewrites. I played around with adding -# NOINLINE functionName #- pragmas to disable inlining various functions to try and provoke a situation where the above rule could match, but it was a losing battle: GHC's built-in optimisations are just too good. But, it's also moot: the outcome I want (the filters to be fused) is happening, it's just the built-in rewrite rules are achieving it, once striot's functions have been inlined away.

13 September 2021

Joachim Breitner: A Candid explainer: Language integration

This is the forth post in a series about the interface description language Candid. Now for something completely different: How does Candid interact with the various host languages, i.e. the actual programming languages that you write your services and clients in? There are two facets to that question:
  1. How is the Candid interface represented inside the language? Some languages with rich type systems can express all relevant information about a Candid method or service within its own type system, and then the concrete serialization/deserialization code can be derived from that type (e.g. using type classes in Haskell, Traits in Rust, or built into the compiler in Motoko). Other languages have a less rich type system (e.g. C), no type-driven generic programming or are simply dynamically typed. In these cases, the Candid type has to be either transformed into specific code for that service by some external tool (e.g. JavaScript and TypeScript) or the Candid description has to be parsed and interpreted at runtime. Either approach will give rise to a type mapping between the Candid types and the host language types. Developers will likely have to know which types correspond to which, which is why the Candid manual s section on types explicitly lists that.
  2. How is the Candid interface description produced and consumed? This is maybe the even more important question; what comes first: The code written in the host language, or the Candid description. There are multiple ways to tackle this, all of which have their merits, so I let s look at some typical approaches.

Generating candid from the host language In many case you don t care too much about the interface of your service, and you just want to write the functionality, and get the interface definition for free. This is what you get when you write Motoko services, where the compiler calculates the Candid interface based on the Motoko types of your actor methods, and the build tool (dfx) puts that Candid file where it needs to go. You can thus develop services without ever writing or even looking at Candid type definitions. The Candid library for Rust supports that mode as well, although you have to add some macros to your program to use it. A downside of this model is that you have only indirect control over the generated Candid. Since it is type-driven, whenever there is more than one sensible Candid type for a given host language type, the translation tool has to make a choice, and if that does not suit you, that can be a problem. In the case of Motoko we were able to co-design it with Candid, and their type systems are similar enough that this works well in practice. We have a specification of Candid-Motoko-type-mappings, and the type export from from Motoko to Candid is almost surjective. (Almost, because of Candid s float32 type, which Motoko simply does not have, and because of service types with methods names that are not valid Motoko identifiers.)

Checking host language against Candid The above works well when you (as the service developer) get to define the service s interface as you go. But sometimes you want to develop a service that adheres to a given Candid interface. For example, in order to respond to HTTP requests in an Internet Computer service, you should provide a method http_request that implements this interface (simplified):
type HeaderField = record   text; text;  ;
type HttpRequest = record  
  method: text;
  url: text;
  headers: vec HeaderField;
  body: blob;
 ;
type HttpResponse = record  
  status_code: nat16;
  headers: vec HeaderField;
  body: blob;
 ;
service :  
  http_request: (request: HttpRequest) -> (HttpResponse) query;
 
Here, a suitable mode of operation is to generate the Candid description of the service that you built, and then compare it against this expected interface with a tool that implements the Candid subtyping relation. This would then complain if what you wrote was not compatible with the above interface. The didc check tool that comes with the Rust library can do that. If your service has to implement multiple such pre-defined interfaces, its actual interface will end up being a subtype of each of these interfaces.

Importing Candid If you already have a Candid file, in particular if you are writing a client that wants to talk to an existing service, you can also import that Candid file into your language. This is a very common mode of operation for such interface descriptions languages (e.g. Protobuf). The details depend a lot on the host language, though:
  • In Motoko, you can import typed actor references: Just write import C "canister:foo" where foo is the name of another canister in your project, and your build tool (dfx) will pass the Candid interface of foo to the Motoko compiler, which then translates that Candid service type into a Motoko actor type for you to use. The mapping from Candid types to Motoko types is specified in IDL-Motoko.md as well, via the function i( ). The vision was always that you can import a reference to any canister on the Internet Computer this way (import C "ic:7e6iv-biaaa-aaaaf-aaada-cai"), and the build tool would fetch the interface automatically, but that has not been implemented yet, partly because of disagreement about how canisters expose their interface (see below). The Motoko compiler is ready, though, as described in its build tool interface specification. What is still missing in Motoko is a way to import a Candid type alone (without a concrete canister reference), to use the types somewhere (in function arguments, or to assert the type of the full canister).
  • The Rust library does not support importing Candid, as far as I know. If you write a service client in Rust, you have to know which Rust types map to the right Candid types, and manually get that right.
  • For JavaScript and TypeScript, the didc tool that comes with the Rust library can take a Candid file and produce JS resp. TS code that gives you an object representing the service with properly typed methods that you can easily interact with.
  • With the Haskell Candid library you can import Candid inline or from a file, and it uses metaprogramming (Template Haskell) to generate suitable Haskell types for you, which you can encode/decode at. This is for example used in the test suite of the Internet Identity, which executes that service in a simulated Internet Computer environment.

Generic and dynamic use Finally, it s worth mentioning that Candid can be used generically and dynamically:
  • Since Canisters can indicate their interface, a website like ic.rocks that enumerates Canisters can read that interface, and provide a fully automatically generated UI for them. For example, you can not only see the Candid interface of the Internet Identity canister at https://ic.rocks/principal/rdmx6-jaaaa-aaaaa-aaadq-cai, but actually interact with it!
  • Similarly, during development of a service, it is very useful to be able to interact with it before you have written your actual front-end. The Candid UI tool provides that functionality, and can be used during local development or on-chain. It is also integrated into the Internet Computer playground.
  • Command line tools like dfx allow you to make calls to services, even without having their actual Candid interface description around. However, such dynamic use was never part of the original design of Candid, so it is a bit rough around the edges the textual format is a bit unwieldy, you need to get the types right, and field name in the responses may be missing.
Do you want to know why field names are missing then? Then check out the next and final post of this series, where I discuss a number of Candid s quirks.

12 September 2021

Vincent Bernat: Short feedback on Cisco pyATS and Genie Parser

Cisco pyATS is a framework for network automation and testing. It includes, among other things, an open-source multi-vendor set of parsers and models, Genie Parser. It features 2700 parsers for various commands over many network OS. On the paper, this seems a great tool!
>>> from genie.conf.base import Device
>>> device = Device("router", os="iosxr")
>>> # Hack to parse outputs without connecting to a device
>>> device.custom.setdefault("abstraction",  )["order"] = ["os", "platform"]
>>> cmd = "show route ipv4 unicast"
>>> output = """
... Tue Oct 29 21:29:10.924 UTC
...
... O    10.13.110.0/24 [110/2] via 10.12.110.1, 5d23h, GigabitEthernet0/0/0/0.110
... """
>>> device.parse(cmd, output=output)
 'vrf':  'default':  'address_family':  'ipv4':  'routes':  '10.13.110.0/24':  'route': '10.13.110.0/24',
       'active': True,
       'route_preference': 110,
       'metric': 2,
       'source_protocol': 'ospf',
       'source_protocol_codes': 'O',
       'next_hop':  'next_hop_list':  1:  'index': 1,
          'next_hop': '10.12.110.1',
          'outgoing_interface': 'GigabitEthernet0/0/0/0.110',
          'updated': '5d23h' 
First deception: pyATS is closed-source with some exceptions. This is quite annoying if you run into some issues outside Genie Parser. For example, although pyATS is using the ssh command, it cannot leverage my ssh_config file: pyATS resolves hostnames before providing them to ssh. There is no plan to open source pyATS. Then, Genie Parser has two problems:
  1. The data models used are dependent on the vendor and OS, despite the documentation saying otherwise. For example, the data model used for IPv4 interfaces is different between NX-OS and IOS-XR.
  2. The parsers rely on line-by-line regular expressions to extract data and some Python code as glue. This is fragile and may break silently.
To illustrate the second point, let s assume the output of show ipv4 vrf all interface is:
  Loopback10 is Up, ipv4 protocol is Up
    Vrf is default (vrfid 0x60000000)
    Internet protocol processing disabled
  Loopback30 is Up, ipv4 protocol is Down [VRF in FWD reference]
    Vrf is ran (vrfid 0x0)
    Internet address is 203.0.113.17/32
    MTU is 1500 (1500 is available to IP)
    Helper address is not set
    Directed broadcast forwarding is disabled
    Outgoing access list is not set
    Inbound  common access list is not set, access list is not set
    Proxy ARP is disabled
    ICMP redirects are never sent
    ICMP unreachables are always sent
    ICMP mask replies are never sent
    Table Id is 0x0
Because the regular expression to parse an interface name does not expect the extra data after the interface state, Genie Parser ignores the line starting the definition of Loopback30 and parses the output to this structure:1
 
  "Loopback10":  
    "int_status": "up",
    "oper_status": "up",
    "vrf": "ran",
    "vrf_id": "0x0",
    "ipv4":  
      "203.0.113.17/32":  
        "ip": "203.0.113.17",
        "prefix_length": "32"
       ,
      "mtu": 1500,
      "mtu_available": 1500,
      "broadcast_forwarding": "disabled",
      "proxy_arp": "disabled",
      "icmp_redirects": "never sent",
      "icmp_unreachables": "always sent",
      "icmp_replies": "never sent",
      "table_id": "0x0"
     
   
 
While this bug is simple to fix, this is an uphill battle. Any existing or future slight variation in the output of a command could trigger another similar undetected bug, despite the extended test coverage. I have reported and fixed several other silent parsing errors: #516, #529, and #530. A more robust alternative would have been to use TextFSM and to trigger a warning when some output is not recognized, like Batfish, a configuration analysis tool, does. In the future, we should rely on YANG for data extraction, but it is currently not widely supported. SNMP is still a valid possibility but much information is not accessible through this protocol. In the meantime, I would advise you to only use Genie Parser with caution.

  1. As an exercise, the astute reader is asked to write the code to extract the IPv4 from this structure.

7 September 2021

Joachim Breitner: A Candid explainer: Opt is special

This is the third post in a series about the interface description language Candid.

The record extension problem Initially, the upgrade rules of Candid were a straight-forward application of the canonical subtyping rules. This worked and was sound, but it forbid one very commonly requested use case: Extending records in argument position. The subtyping rule for records say that
   record   old_field : nat; new_field : int  
<: record   old_field : nat  
or, in words, that subtypes can have more field than supertypes. This makes intuitive sense: A user of a such a record value that only expects old_field to be there is not bothered if suddenly a new_field appears. But a user who expects new_field to be there is thrown off if it suddenly isn t anymore. Therefore it is ok to extend the records returned by a service with new fields, but not to extend the record in your methods s argument types. But users want to extend their record types over time, also in argument position! In fact, they often want to extend them in both positions. Consider a service with the following interface, where the CUser record appears both in argument and result position:
type CUser = record   login : text; name : text  ;
service C :  
  register_user : (CUser) -> ();
  get_user_data : (text) -> (CUser);
 
It seems quite natural to want to extend the record with a new field (say, the age of the user). But simply changing the definition of CUser to
type CUser = record   login : text; name : text; age : nat  
is not ok, because now register_user requires the age field, but old clients don t provide it. So how can we allow developers to make changes like this (because they really really want that), while keeping the soundness guarantees made by Candid (because we really really want that)? This question has bothered us for over two years, and we even created a meta issue that records the dozen approached we considered, discussed and eventually ditched.

Dynamic subtyping checks in opt I will spare you the history lesson, though, and explain the solution we eventually came up with. In the example above it seems unreasonable to let the developer add a field age of type nat. Since there may be old clients around, the service unavoidably has to deal with records that don t have an age field. If the code expects an age value, what should it do in that case? But one can argue that changing the record type to
type CUser = record   login : text; name : text; age : opt nat  
could work: If the age field is present, use the value. If the field is absent, inject a null value during decoding. In the first-order case, this rather obvious solution would work just fine, and we d be done. But Candid aims to solve the higher order case, and I said things get tricky here, didn t I? Consider another, independent service D with the following interface:
type DUser = record   login : text; name : text  ;
service D :  
  on_user_added : (func (DUser) -> ()) -> ()
 
This service has a method that takes a method reference, presumably with the intention of calling it whenever a new user was added to service D. And because the types line up nicely, we can compose these two services, by once calling D.on_user_added(C.register_user), so that from now on D calls C.register_user( ). These kind of service mesh-ups are central to the vision of the Internet Computer! But what happens if the services now evolve their types in different ways, e.g. towards
type CUser = record   login : text; name : text; age : opt nat  
and
type DUser = record   login : text; name : text; age : opt variant   under_age; adult  
Individually, these are type changes that we want to allow. But now the call from D to C may transmit a value of record ; age = opt variant under_age when C expects a natural number! This is precisely what we want to prevent by introducing types, and it seems we have lost soundness. The best solution we could find is to make the opt type somewhat special, and apply these extra rules when decoding at an expected type of opt t.
  • If this was a record field, and the provided record value doesn t even have a field of that name, don t fail but instead treat this as null. This handles the first-order example above.
  • If there is a value, look at its type (which, in Candid, is part of the message).
    • If it is opt t' and t' <: t, then decode as normal.
    • If it is opt t' but t' <: t does not hold, then treat that as null. This should only happen in these relatively obscure higher-order cases where services evolved differently and incompatibly, and makes sure that the calls that worked before the upgrades will continue to work afterwards. It is not advisable to actually use that rule when changing your service s interface. Tools that assist the developer with an upgrade check should prevent or warn about the use of this rule.
  • Not strictly required here, but since we are making opt special anyways: If its type t' is not of the form opt , pretend it was opt t', and also pretend that the given value was wrapped in opt. This allows services to make record field in arguments that were required in the old version optional in a new version, e.g. as a way to deprecated them. So it is mildly useful, although I can report that it makes the meta-theory and implementation rather complex, in particular together with equirecursion and beasts like type O = opt O. See this discussion for a glimpse of that.
In the above I stress that we look at the type of the provided value, and not just the value. For example, if the sender sends the value opt vec at type opt vec nat, and the recipient expects opt vec bool, then this will decode as null, even though one could argue that the value opt vec could easily be understood at type opt vec bool. We initially had that, but then noticed that this still breaks soundness when there are references inside, and we have to do a full subtyping check in the decoder. This is very unfortunate, because it makes writing a Candid decoder a noticeably harder task that requires complicated graph algorithms with memoization (which I must admit Motoko has not implemented yet), but it s the least bad solution we could find so far.

Isn t that just dynamic typing? You might have noticed that with these rules, t <: opt t' holds for all types t and t'. In other words, every opt is a top type (like reserved), thus all optional types are equivalent. One could argue that we are throwing all of the benefits of static typing over board this way. But it s not quite as bad: It s true that decoding Candid values now involves a dynamic check inserting null values in certain situations, but as long as everyone plays by the rules (i.e. upgrades their services according to the Candid safe upgrade rules, and heeds the warning alluded to above), these certain situations will only happen in the obscurest of cases. It is, by the way, not material to this solution that the special subtyping behavior is applied to the opt type, and a neighboring point in the design space would be a dedicated upgraded t type constructor. That would allow developers to use the canonical opt type with the usual subtyping rules and communicate their intent ( clients should consider this field optional vs. old clients don t know about this field, but new clients should use it ) more cleanly at the expense of having more non-canonical types in the type system. To see why it is convenient if Candid has mostly just the normal types, read the next post, which will describe how Candid can be integrated into a host language.

6 September 2021

Vincent Bernat: Switching to the i3 window manager

I have been using the awesome window manager for 10 years. It is a tiling window manager, configurable and extendable with the Lua language. Using a general-purpose programming language to configure every aspect is a double-edged sword. Due to laziness and the apparent difficulty of adapting my configuration about 3000 lines to newer releases, I was stuck with the 3.4 version, whose last release is from 2013. It was time for a rewrite. Instead, I have switched to the i3 window manager, lured by the possibility to migrate to Wayland and Sway later with minimal pain. Using an embedded interpreter for configuration is not as important to me as it was in the past: it brings both complexity and brittleness.
i3 dual screen setup
Dual screen desktop running i3, Emacs, some terminals, including a Quake console, Firefox, Polybar as the status bar, and Dunst as the notification daemon.
The window manager is only one part of a desktop environment. There are several options for the other components. I am also introducing them in this post.

i3: the window manager i3 aims to be a minimal tiling window manager. Its documentation can be read from top to bottom in less than an hour. i3 organize windows in a tree. Each non-leaf node contains one or several windows and has an orientation and a layout. This information arbitrates the window positions. i3 features three layouts: split, stacking, and tabbed. They are demonstrated in the below screenshot:
Example of layouts
Demonstration of the layouts available in i3. The main container is split horizontally. The first child is split vertically. The second one is tabbed. The last one is stacking.
Tree representation of the previous screenshot
Tree representation of the previous screenshot.
Most of the other tiling window managers, including the awesome window manager, use predefined layouts. They usually feature a large area for the main window and another area divided among the remaining windows. These layouts can be tuned a bit, but you mostly stick to a couple of them. When a new window is added, the behavior is quite predictable. Moreover, you can cycle through the various windows without thinking too much as they are ordered. i3 is more flexible with its ability to build any layout on the fly, it can feel quite overwhelming as you need to visualize the tree in your head. At first, it is not unusual to find yourself with a complex tree with many useless nested containers. Moreover, you have to navigate windows using directions. It takes some time to get used to. I set up a split layout for Emacs and a few terminals, but most of the other workspaces are using a tabbed layout. I don t use the stacking layout. You can find many scripts trying to emulate other tiling window managers but I did try to get my setup pristine of these tentatives and get a chance to familiarize myself. i3 can also save and restore layouts, which is quite a powerful feature. My configuration is quite similar to the default one and has less than 200 lines.

i3 companion: the missing bits i3 philosophy is to keep a minimal core and let the user implements missing features using the IPC protocol:
Do not add further complexity when it can be avoided. We are generally happy with the feature set of i3 and instead focus on fixing bugs and maintaining it for stability. New features will therefore only be considered if the benefit outweighs the additional complexity, and we encourage users to implement features using the IPC whenever possible. Introduction to the i3 window manager
While this is not as powerful as an embedded language, it is enough for many cases. Moreover, as high-level features may be opinionated, delegating them to small, loosely coupled pieces of code keeps them more maintainable. Libraries exist for this purpose in several languages. Users have published many scripts to extend i3: automatic layout and window promotion to mimic the behavior of other tiling window managers, window swallowing to put a new app on top of the terminal launching it, and cycling between windows with Alt+Tab. Instead of maintaining a script for each feature, I have centralized everything into a single Python process, i3-companion using asyncio and the i3ipc-python library. Each feature is self-contained into a function. It implements the following components:
make a workspace exclusive to an application
When a workspace contains Emacs or Firefox, I would like other applications to move to another workspace, except for the terminal which is allowed to intrude into any workspace. The workspace_exclusive() function monitors new windows and moves them if needed to an empty workspace or to one with the same application already running.
implement a Quake console
The quake_console() function implements a drop-down console available from any workspace. It can be toggled with Mod+ . This is implemented as a scratchpad window.
back and forth workspace switching on the same output
With the workspace back_and_forth command, we can ask i3 to switch to the previous workspace. However, this feature is not restricted to the current output. I prefer to have one keybinding to switch to the workspace on the next output and one keybinding to switch to the previous workspace on the same output. This behavior is implemented in the previous_workspace() function by keeping a per-output history of the focused workspaces.
create a new empty workspace or move a window to an empty workspace
To create a new empty workspace or move a window to an empty workspace, you have to locate a free slot and use workspace number 4 or move container to workspace number 4. The new_workspace() function finds a free number and use it as the target workspace.
restart some services on output change
When adding or removing an output, some actions need to be executed: refresh the wallpaper, restart some components unable to adapt their configuration on their own, etc. i3 triggers an event for this purpose. The output_update() function also takes an extra step to coalesce multiple consecutive events and to check if there is a real change with the low-level library xcffib.
I will detail the other features as this post goes on. On the technical side, each function is decorated with the events it should react to:
@on(CommandEvent("previous-workspace"), I3Event.WORKSPACE_FOCUS)
async def previous_workspace(i3, event):
    """Go to previous workspace on the same output."""
The CommandEvent() event class is my way to send a command to the companion, using either i3-msg -t send_tick or binding a key to a nop command. The latter is used to avoid spawning a shell and a i3-msg process just to send a message. The companion listens to binding events and checks if this is a nop command.
bindsym $mod+Tab nop "previous-workspace"
There are other decorators to avoid code duplication: @debounce() to coalesce multiple consecutive calls, @static() to define a static variable, and @retry() to retry a function on failure. The whole script is a bit more than 1000 lines. I think this is worth a read as I am quite happy with the result.

dunst: the notification daemon Unlike the awesome window manager, i3 does not come with a built-in notification system. Dunst is a lightweight notification daemon. I am running a modified version with HiDPI support for X11 and recursive icon lookup. The i3 companion has a helper function, notify(), to send notifications using DBus. container_info() and workspace_info() uses it to display information about the container or the tree for a workspace.
Notification showing i3 tree for a workspace
Notification showing i3 s tree for a workspace

polybar: the status bar i3 bundles i3bar, a versatile status bar, but I have opted for Polybar. A wrapper script runs one instance for each monitor. The first module is the built-in support for i3 workspaces. To not have to remember which application is running in a workspace, the i3 companion renames workspaces to include an icon for each application. This is done in the workspace_rename() function. The icons are from the Font Awesome project. I maintain a mapping between applications and icons. This is a bit cumbersome but it looks great.
i3 workspaces in Polybar
i3 workspaces in Polybar
For CPU, memory, brightness, battery, disk, and audio volume, I am relying on the built-in modules. Polybar s wrapper script generates the list of filesystems to monitor and they get only displayed when available space is low. The battery widget turns red and blinks slowly when running out of power. Check my Polybar configuration for more details.
Various modules for Polybar
Polybar displaying various information: CPU usage, memory usage, screen brightness, battery status, Bluetooth status (with a connected headset), network status (connected to a wireless network and to a VPN), notification status, and speaker volume.
For Bluetooh, network, and notification statuses, I am using Polybar s ipc module: the next version of Polybar can receive an arbitrary text on an IPC socket. The module is defined with a single hook to be executed at the start to restore the latest status.
[module/network]
type = custom/ipc
hook-0 = cat $XDG_RUNTIME_DIR/i3/network.txt 2> /dev/null
initial = 1
It can be updated with polybar-msg action "#network.send.XXXX". In the i3 companion, the @polybar() decorator takes the string returned by a function and pushes the update through the IPC socket. The i3 companion reacts to DBus signals to update the Bluetooth and network icons. The @on() decorator accepts a DBusSignal() object:
@on(
    StartEvent,
    DBusSignal(
        path="/org/bluez",
        interface="org.freedesktop.DBus.Properties",
        member="PropertiesChanged",
        signature="sa sv as",
        onlyif=lambda args: (
            args[0] == "org.bluez.Device1"
            and "Connected" in args[1]
            or args[0] == "org.bluez.Adapter1"
            and "Powered" in args[1]
        ),
    ),
)
@retry(2)
@debounce(0.2)
@polybar("bluetooth")
async def bluetooth_status(i3, event, *args):
    """Update bluetooth status for Polybar."""
The middle of the bar is occupied by the date and a weather forecast. The latest also uses the IPC mechanism, but the source is a Python script triggered by a timer.
Date and weather in Polybar
Current date and weather forecast for the day in Polybar. The data is retrieved with the OpenWeather API.
I don t use the system tray integrated with Polybar. The embedded icons usually look horrible and they all behave differently. A few years back, Gnome has removed the system tray. Most of the problems are fixed by the DBus-based Status Notifier Item protocol also known as Application Indicators or Ayatana Indicators for GNOME. However, Polybar does not support this protocol. In the i3 companion, The implementation of Bluetooth and network icons, including displaying notifications on change, takes about 200 lines. I got to learn a bit about how DBus works and I get exactly the info I want.

picom: the compositor I like having slightly transparent backgrounds for terminals and to reduce the opacity of unfocused windows. This requires a compositor.1 picom is a lightweight compositor. It works well for me, but it may need some tweaking depending on your graphic card.2 Unlike the awesome window manager, i3 does not handle transparency, so the compositor needs to decide by itself the opacity of each window. Check my configuration for details.

systemd: the service manager I use systemd to start i3 and the various services around it. My xsession script only sets some environment variables and lets systemd handles everything else. Have a look at this article from Micha G ral for the rationale. Notably, each component can be easily restarted and their logs are not mangled inside the ~/.xsession-errors file.3 I am using a two-stage setup: i3.service depends on xsession.target to start services before i3:
[Unit]
Description=X session
BindsTo=graphical-session.target
Wants=autorandr.service
Wants=dunst.socket
Wants=inputplug.service
Wants=picom.service
Wants=pulseaudio.socket
Wants=policykit-agent.service
Wants=redshift.service
Wants=spotify-clean.timer
Wants=ssh-agent.service
Wants=xiccd.service
Wants=xsettingsd.service
Wants=xss-lock.service
Then, i3 executes the second stage by invoking the i3-session.target:
[Unit]
Description=i3 session
BindsTo=graphical-session.target
Wants=wallpaper.service
Wants=wallpaper.timer
Wants=polybar-weather.service
Wants=polybar-weather.timer
Wants=polybar.service
Wants=i3-companion.service
Wants=misc-x.service
Have a look on my configuration files for more details.

rofi: the application launcher Rofi is an application launcher. Its appearance can be customized through a CSS-like language and it comes with several themes. Have a look at my configuration for mine.
Rofi as an application launcher
Rofi as an application launcher
It can also act as a generic menu application. I have a script to control a media player and another one to select the wifi network. It is quite a flexible application.
Rofi as a wifi network selector
Rofi to select a wireless network

xss-lock and i3lock: the screen locker i3lock is a simple screen locker. xss-lock invokes it reliably on inactivity or before a system suspend. For inactivity, it uses the XScreenSaver events. The delay is configured using the xset s command. The locker can be invoked immediately with xset s activate. X11 applications know how to prevent the screen saver from running. I have also developed a small dimmer application that is executed 20 seconds before the locker to give me a chance to move the mouse if I am not away.4 Have a look at my configuration script.
Demonstration of xss-lock, xss-dimmer and i3lock with a 4 speedup.

The remaining components
  • autorandr is a tool to detect the connected display, match them against a set of profiles, and configure them with xrandr.
  • inputplug executes a script for each new mouse and keyboard plugged. This is quite useful to load the appropriate the keyboard map. See my configuration.
  • xsettingsd provides settings to X11 applications, not unlike xrdb but it notifies applications for changes. The main use is to configure the Gtk and DPI settings. See my article on HiDPI support on Linux with X11.
  • Redshift adjusts the color temperature of the screen according to the time of day.
  • maim is a utility to take screenshots. I use Prt Scn to trigger a screenshot of a window or a specific area and Mod+Prt Scn to capture the whole desktop to a file. Check the helper script for details.
  • I have a collection of wallpapers I rotate every hour. A script selects them using advanced machine learning algorithms and stitches them together on multi-screen setups. The selected wallpaper is reused by i3lock.

  1. Apart from the eye candy, a compositor also helps to get tear-free video playbacks.
  2. My configuration works with both Haswell (2014) and Whiskey Lake (2018) Intel GPUs. It also works with AMD GPU based on the Polaris chipset (2017).
  3. You cannot manage two different displays this way e.g. :0 and :1. In the first implementation, I did try to parametrize each service with the associated display, but this is useless: there is only one DBus user session and many services rely on it. For example, you cannot run two notification daemons.
  4. I have only discovered later that XSecureLock ships such a dimmer with a similar implementation. But mine has a cool countdown!

Dirk Eddelbuettel: tidyCpp 0.0.4 on CRAN: Adding a Simple Numeric Vector Class

Another release of the tidyCpp package arrived on CRAN earlier today. The packages offers a clean C++ layer on top of the C API for R which aims to make its use a little easier and more consistent. The vignette has been extended once more with a new example, and added a table of contents. The package now supports a (truly minimal) C++ class for a numeric vector which is the most likely use case. The NEWS entry follows and includes the 0.0.3 release earlier in the year which did not get the usual attention of post-release blog post.

Changes in tidyCpp version 0.0.4 (2021-09-05)
  • Minor updates to DESCRIPTION
  • New snippet rollminmaxExample with simple vector use
  • New class NumVec motivated from rolling min/max example
  • Expand the vignette with C++ example based on NumVec
  • Add a table of contents to the vignette

Changes in tidyCpp version 0.0.3 (2021-03-07)
  • Switch CI use to r-ci
  • Protect nil object definition

Thanks to my CRANberries, there is also a diffstat report for this release. For questions, suggestions, or issues please use the issue tracker at the GitHub repo. If you like this or other open-source work I do, you can now sponsor me at GitHub.

This post by Dirk Eddelbuettel originated on his Thinking inside the box blog. Please report excessive re-aggregation in third-party for-profit settings.

5 September 2021

Antoine Beaupr : Automating major Debian upgrades

It's major upgrade time again! The Debian project just published the Debian 11 "bullseye" release, and it's pretty awesome! This makes me realized that I have never written here about my peculiar upgrade process, and figured it was worth bringing that up to a wider audience. My upgrade process also has a notable changes section which includes major version changes (e.g. Inkscape 1.0!), new packages (e.g. podman!) and important behavior changes (e.g. driverless scanning and printing!). I'm particularly interested to hear about any significant change I might have missed. If you know of a cool new package that shipped with bullseye and that I forgot, do let me know! But that's for the cool new stuff. We need to talk about the problems with Debian major upgrades.

Background I have been maintaining detailed upgrade guides, on my wiki, starting with the jessie release, but I have actually written such guides for Koumbit.org as far back as Debian squeeze in 2011 (another worker wrote the older Debian lenny upgrade guide in 2009). Koumbit, since then, has kept maintaining those guides all the way to the latest bullseye upgrade, through 7 major releases! Over the years, those guides evolved from a quick "cheat-sheet" format copied from the release notes into a more or less "scripted" form that I currently use. Each guide has a procedure made of a few steps that can be basically copy-pasted to batch-upgrade a host (or multiple hosts in parallel) as quickly as possible. There is also the predict-os script which allows you to keep track of progress of the upgrades in a Puppet cluster.

Limitations of the official procedure In comparison with my procedure, the official upgrade guide is mostly designed to upgrade a single machine, typically a workstation, with a rather slow and exhaustive process. The PDF version of the upgrade guide is 14 pages long! This, obviously, does not work when you have tens or hundreds of machines to upgrade. Debian upgrades are notorious for being extremely reliable, but we have a lot of packages, and there are always corner cases where the upgrade will just fail because of a bug specific to your environment. Those will only be fixed after some back and forth in the community (and that's assuming users report those bugs, which is not always the case). There's no obvious way to deploy "hot fixes" in this context, at least not without fixing the package and publishing it on an unofficial Debian archive while the official ones catch up. This is slow and difficult. Or some packages require manual labor. Examples of this are the PostgreSQL or Ganeti packages which require you to upgrade your clusters by hand, while the old and new packages live side by side. Debian packages bring you far in the upgrade process, but sometimes not all the way. Which means every Debian install needs to be manually upgraded and inspected when a new release comes out. That's slow and error prone and we can do better.

How to automate major upgrades I have a proposal to automate this. It's been mostly dormant in the Debian wiki, for 5 years now. Fundamentally, this is a hard problem: Debian gets installed in so many different environments, from workstations to physical servers to virtual machines, embedded systems and so on, that it's extremely hard to come up with a "one size fits all" system. The (manual) procedure I'm using is mostly targeting servers, but I'm also using it on workstations. And I'll note that it's specific to my home setup: I have a different procedure at work, although it has a lot of common code. To automate this, I would factor out that common code with hooks where you could easily inject special code like "you need to upgrade ferm first", "you need an extra reboot here", or "this is how you finish the PostgreSQL upgrade". With Debian getting closer to a 2 year release cycle, with the previous release being supported basically only one year after the new stable comes out, I feel more and more strongly that this needs better automation. So I'm thinking that I should write a prototype for this. Ubuntu has do-release-upgrade that is too Ubuntu-specific to be reused. An attempt at collaborating on this has been mostly met with silence from Ubuntu's side as well. I'm thinking that using something like Fabric, Mitogen, or Transilience: anything that will allow me to write simple, portable Python code that can run transparently on a local machine (for single systems upgrades, possibly with a GUI frontend) to remote servers (for large clusters of servers, maybe with canaries and grouping using Cumin). I'll note that Koumbit started experimenting with Puppet Bolt in the bullseye upgrade process, but that feels too site-specific to be useful more broadly.

Trade-offs I am not sure where this stands in the XKCD time trade-off evaluation, because the table doesn't actually cover the time frequency of Debian release (which is basically "biennial") and the amount of time the upgrade would take across a cluster (which varies a lot, but that I estimate to be between one to 6 hours per machine). Assuming I have 80 machines to upgrade, that is 80 to 480 hours (between ~3 to 20 days) of work! It's unclear how much work such an automated system would shave off, however. Assuming things are an order of magnitude faster (say I upgrade 10 machines at a time), I would shave off between 3 and 18 days of work, which implies I might allow myself to spend a minimum of 5 days working on such a project.

The other option: never upgrade Before people mention those: I am aware of containers, Kubernetes, and other deployment mechanisms. Indeed, those may be a long-term solution, we currently can't afford to migrate everything over to containers right now: that is a huge migration and a total paradigm shift. At that point, whatever is left might not even be Debian in the first place. And besides, if you run Kubernetes, you still need to run some OS underneath and upgrade that, so that problem never completely disappears. Still, maybe that's the final answer: never upgrade. For some stateless machines like DNS replicas or load balancers, that might make a lot of sense as there's no or little data to carry to the new host. But this implies a seamless and fast provisioning process, and we don't have that either: at my work, installing a machine takes about as long as upgrading it, and that's after a significant amount of work automating that process, partly writing my own Debian installer with Fabric (!).

What is your process? I'm curious to hear what people think of those ideas. It strikes me as really odd that no one has really tackled that problem yet, considering how many clusters of Debian machines are out there. Surely people are upgrading those, and not following that slow step by step guide, right? I suspect everyone is doing the same thing: we all have our little copy-paste script we batch onto multiple machines, sometimes in parallel. That is what the Debian.org sysadmins are doing as well. There must be a better way. What is yours?

My upgrades so far So far, I have upgraded 2 out of my 3 home machines running buster -- others have been installed directly in bullseye -- with only my main, old, messy server left. Upgrades have been pretty painless so far (see another report, for example), much better than the previous buster upgrade. Obviously, for me personal use, automating this is pointless. Work-side, however, is another story: we have over 80 boxes to upgrade there and that will take a while. The last stretch to buster cycle took about two years to complete, so we might be done by the time the next release (12, "bookworm") is released, but that's actually a full year after "buster" becomes EOL, so it's actually too late... At least I fixed the installers so that new the machines we create all ship with bullseye, so we stopped accumulating new buster hosts...
Thanks to lelutin and pabs for reviewing a draft of this post.

Reproducible Builds: Reproducible Builds in August 2021

Welcome to the latest report from the Reproducible Builds project. In this post, we round up the important things that happened in the world of reproducible builds in August 2021. As always, if you are interested in contributing to the project, please visit the Contribute page on our website.
There were a large number of talks related to reproducible builds at DebConf21 this year, the 21st annual conference of the Debian Linux distribution (full schedule):
PackagingCon (@PackagingCon) is new conference for developers of package management software as well as their related communities and stakeholders. The virtual event, which is scheduled to take place on the 9th and 10th November 2021, has a mission is to bring different ecosystems together: from Python s pip to Rust s cargo to Julia s Pkg, from Debian apt over Nix to conda and mamba, and from vcpkg to Spack we hope to have many different approaches to package management at the conference . A number of people from reproducible builds community are planning on attending this new conference, and some may even present. Tickets start at $20 USD.
As reported in our May report, the president of the United States signed an executive order outlining policies aimed to improve the cybersecurity in the US. The executive order comes after a number of highly-publicised security problems such as a ransomware attack that affected an oil pipeline between Texas and New York and the SolarWinds hack that affected a large number of US federal agencies. As a followup this month, however, a detailed fact sheet was released announcing a number large-scale initiatives and that will undoubtedly be related to software supply chain security and, as a result, reproducible builds.
Lastly, We ran another productive meeting on IRC in August (original announcement) which ran for just short of two hours. A full set of notes from the meeting is available.

Software development kpcyrd announced an interesting new project this month called I probably didn t backdoor this which is an attempt to be:
a practical attempt at shipping a program and having reasonably solid evidence there s probably no backdoor. All source code is annotated and there are instructions explaining how to use reproducible builds to rebuild the artifacts distributed in this repository from source. The idea is shifting the burden of proof from you need to prove there s a backdoor to we need to prove there s probably no backdoor . This repository is less about code (we re going to try to keep code at a minimum actually) and instead contains technical writing that explains why these controls are effective and how to verify them. You are very welcome to adopt the techniques used here in your projects. ( )
As the project s README goes on the mention: the techniques used to rebuild the binary artifacts are only possible because the builds for this project are reproducible . This was also announced on our mailing list this month in a thread titled i-probably-didnt-backdoor-this: Reproducible Builds for upstreams. kpcyrd also wrote a detailed blog post about the problems surrounding Linux distributions (such as Alpine and Arch Linux) that distribute compiled Python bytecode in the form of .pyc files generated during the build process.

diffoscope diffoscope is our in-depth and content-aware diff utility. Not only can it locate and diagnose reproducibility issues, it can provide human-readable diffs from many kinds of binary formats. This month, Chris Lamb made a number of changes, including releasing version 180), version 181) and version 182) as well as the following changes:
  • New features:
    • Add support for extracting the signing block from Android APKs. [ ]
    • If we specify a suffix for a temporary file or directory within the code, ensure it starts with an underscore (ie. _ ) to make the generated filenames more human-readable. [ ]
    • Don t include short GCC lines that differ on a single prefix byte either. These are distracting, not very useful and are simply the strings(1) command s idea of the build ID, which is displayed elsewhere in the diff. [ ][ ]
    • Don t include specific .debug-like lines in the ELF-related output, as it is invariably a duplicate of the debug ID that exists better in the readelf(1) differences for this file. [ ]
  • Bug fixes:
    • Add a special case to SquashFS image extraction to not fail if we aren t the superuser. [ ]
    • Only use java -jar /path/to/apksigner.jar if we have an apksigner.jar as newer versions of apksigner in Debian use a shell wrapper script which will be rejected if passed directly to the JVM. [ ]
    • Reduce the maximum line length for calculating Wagner-Fischer, improving the speed of output generation a lot. [ ]
    • Don t require apksigner in order to compare .apk files using apktool. [ ]
    • Update calls (and tests) for the new version of odt2txt. [ ]
  • Output improvements:
    • Mention in the output if the apksigner tool is missing. [ ]
    • Profile diffoscope.diff.linediff and specialize. [ ][ ]
  • Logging improvements:
    • Format debug-level messages related to ELF sections using the diffoscope.utils.format_class. [ ]
    • Print the size of generated reports in the logs (if possible). [ ]
    • Include profiling information in --debug output if --profile is not set. [ ]
  • Codebase improvements:
    • Clarify a comment about the HUGE_TOOLS Python dictionary. [ ]
    • We can pass -f to apktool to avoid creating a strangely-named subdirectory. [ ]
    • Drop an unused File import. [ ]
    • Update the supported & minimum version of Black. [ ]
    • We don t use the logging variable in a specific place, so alias it to an underscore (ie. _ ) instead. [ ]
    • Update some various copyright years. [ ]
    • Clarify a comment. [ ]
  • Test improvements:
    • Update a test to check specific contents of SquashFS listings, otherwise it fails depending on the test systems user ID to username passwd(5) mapping. [ ]
    • Assign seen and expected values to local variables to improve contextual information in failed tests. [ ]
    • Don t print an orphan newline when the source code formatting test passes. [ ]

In addition Santiago Torres Arias added support for Squashfs version 4.5 [ ] and Felix C. Stegerman suggested a number of small improvements to the output of the new APK signing block [ ]. Lastly, Chris Lamb uploaded python-libarchive-c version 3.1-1 to Debian experimental for the new 3.x branch python-libarchive-c is used by diffoscope.

Distribution work In Debian, 68 reviews of packages were added, 33 were updated and 10 were removed this month, adding to our knowledge about identified issues. Two new issue types have been identified too: nondeterministic_ordering_in_todo_items_collected_by_doxygen and kodi_package_captures_build_path_in_source_filename_hash. kpcyrd published another monthly report on their work on reproducible builds within the Alpine and Arch Linux distributions, specifically mentioning rebuilderd, one of the components powering reproducible.archlinux.org. The report also touches on binary transparency, an important component for supply chain security. The @GuixHPC account on Twitter posted an infographic on what fraction of GNU Guix packages are bit-for-bit reproducible: Finally, Bernhard M. Wiedemann posted his monthly reproducible builds status report for openSUSE.

Upstream patches The Reproducible Builds project detects, dissects and attempts to fix as many currently-unreproducible packages as possible. We endeavour to send all of our patches upstream where appropriate. This month, we wrote a large number of such patches, including: Elsewhere, it was discovered that when supporting various new language features and APIs for Android apps, the resulting APK files that are generated now vary wildly from build to build (example diffoscope output). Happily, it appears that a patch has been committed to the relevant source tree. This was also discussed on our mailing list this month in a thread titled Android desugaring and reproducible builds started by Marcus Hoffmann.

Website and documentation There were quite a few changes to the Reproducible Builds website and documentation this month, including:
  • Felix C. Stegerman:
    • Update the website self-build process to not use the buster-backports suite now that Debian Bullseye is the stable release. [ ]
  • Holger Levsen:
    • Add a new page documenting various package rebuilder solutions. [ ]
    • Add some historical talks and slides from DebConf20. [ ][ ]
    • Various improvements to the history page. [ ][ ][ ]
    • Rename the Comparison protocol documentation category to Verification . [ ]
    • Update links to F-Droid documentation. [ ]
  • Ian Muchina:
    • Increase the font size of titles and de-emphasize event details on the talk page. [ ]
    • Rename the README file to README.md to improve the user experience when browsing the Git repository in a web browser. [ ]
  • Mattia Rizzolo:
    • Drop a position:fixed CSS statement that is negatively affecting with some width settings. [ ]
    • Fix the sizing of the elements inside the side navigation bar. [ ]
    • Show gold level sponsors and above in the sidebar. [ ]
    • Updated the documentation within reprotest to mention how ldconfig conflicts with the kernel variation. [ ]
  • Roland Clobus:
    • Added a ticket number for the issue with the live Cinnamon image and diffoscope. [ ]

Testing framework The Reproducible Builds project runs a testing framework at tests.reproducible-builds.org, to check packages and other artifacts for reproducibility. This month, the following changes were made:
  • Holger Levsen:
    • Debian-related changes:
      • Make a large number of changes to support the new Debian bookworm release, including adding it to the dashboard [ ], start scheduling tests [ ], adding suitable Apache redirects [ ] etc. [ ][ ][ ][ ][ ]
      • Make the first build use LANG=C.UTF-8 to match the official Debian build servers. [ ]
      • Only test Debian Live images once a week. [ ]
      • Upgrade all nodes to use Debian Bullseye [ ] [ ]
      • Update README documentation for the Debian Bullseye release. [ ]
    • Other changes:
      • Only include rsync output if the $DEBUG variable is enabled. [ ]
      • Don t try to install mock, a tool used to build Fedora packages some time ago. [ ]
      • Drop an unused function. [ ]
      • Various documentation improvements. [ ][ ]
      • Improve the node health check to detect zombie jobs. [ ]
  • Jessica Clarke (FreeBSD-related changes):
    • Update the location and branch name for the main FreeBSD Git repository. [ ]
    • Correctly ignore the source tarball when comparing build results. [ ]
    • Drop an outdated version number from the documentation. [ ]
  • Mattia Rizzolo:
    • Block F-Droid jobs from running whilst the setup is running. [ ]
    • Enable debugging for the rsync job related to Debian Live images. [ ]
    • Pass BUILD_TAG and BUILD_URL environment for the Debian Live jobs. [ ]
    • Refactor the master_wrapper script to use a Bash array for the parameters. [ ]
    • Prefer YAML s safe_load() function over the unsafe variant. [ ]
    • Use the correct variable in the Apache config to match possible existing files on disk. [ ]
    • Stop issuing HTTP 301 redirects for things that not actually permanent. [ ]
  • Roland Clobus (Debian live image generation):
    • Increase the diffoscope timeout from 120 to 240 minutes; the Cinnamon image should now be able to finish. [ ]
    • Use the new snapshot service. [ ]
    • Make a number of improvements to artifact handling, such as moving the artifacts to the Jenkins host [ ] and correctly cleaning them up at the right time. [ ][ ][ ]
    • Where possible, link to the Jenkins build URL that created the artifacts. [ ][ ]
    • Only allow only one job to run at the same time. [ ]
  • Vagrant Cascadian:
    • Temporarily disable armhf nodes for DebConf21. [ ][ ]

Lastly, if you are interested in contributing to the Reproducible Builds project, please visit the Contribute page on our website. You can get in touch with us via:

3 September 2021

Dirk Eddelbuettel: RcppSMC 0.2.4 on CRAN: Even More GSoC !!

A brand new release 0.2.4 of the RcppSMC package arrived on CRAN earlier today, with a dual delay for CRAN closing for a well-earned break, and then being overwhelmed when reopening. Other than that the processing was again versy smooth. RcppSMC provides Rcpp-based bindings to R for the Sequential Monte Carlo Template Classes (SMCTC) by Adam Johansen described in his JSS article. Sequential Monte Carlo is also referred to as Particle Filter in some contexts. The package started when I put some Rcpp bindings together based on Adam s paper and library. It grew when Adam and I supervised Leah South during the 2017 iteration of the Google Summer of Code. And now it grew again as we have Adam, Leah and myself looking over the shoulders of Ilya Zarubin who did very fine work during the 2021 iteration of the Google Summer of Code that just concluded! So we are now GSoC squared! This release is effectively all work by Ilya and summarized below.

Changes in RcppSMC version 0.2.4 (2021-09-01)
  • Multiple Sequential Monte Carlo extensions (Ilya Zarubin as part of Google Summer of Code 2021)
    • Provide informative user output (convergence diagnostics) for PMMH example #50 (Ilya in #50 and #52 addressing #25, bullet point 5)
    • Support for tracking of ancestral lines for base sampler class (Ilya in #56)
    • Support for conditional SMC via derived conditionalSampler class (Ilya in #60)
  • Add URL and BugReports to DESCRIPTION (Dirk in #53)

Courtesy of my CRANberries, there is a diffstat report for this release. More information is on the RcppSMC page. Issues and bugreports should go to the GitHub issue tracker. If you like this or other open-source work I do, you can now sponsor me at GitHub.

This post by Dirk Eddelbuettel originated on his Thinking inside the box blog. Please report excessive re-aggregation in third-party for-profit settings.

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